RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 ZNF645Q8N7E2 425 aa15.36■□□□□ 0.05
CLIP2-208ENST00000491075 FYTTD1Q96QD9 318 aaKnown RBP15.36■□□□□ 0.05
CLIP2-208ENST00000491075 S4R3C0 116 aa15.36■□□□□ 0.05
CLIP2-208ENST00000491075 MFNGO00587 321 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 DEDDO75618 318 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 CRYGCP07315 174 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 IL6RP08887 468 aaPredicted RBP15.35■□□□□ 0.05
CLIP2-208ENST00000491075 ZNF735P0CB33 412 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 HIST1H1BP16401 226 aaKnown RBP15.35■□□□□ 0.05
CLIP2-208ENST00000491075 GNB3P16520 340 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 CD36P16671 472 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 MAS1LP35410 378 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 ARFRP1Q13795 201 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 TRAM1Q15629 374 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 KLK9Q2XQG4 91 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 Q6ZS49 121 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 SLC38A6Q8IZM9 456 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 OR2C3Q8N628 320 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 OR10R2Q8NGX6 335 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 KLK9Q9UKQ9 250 aa15.35■□□□□ 0.05
CLIP2-208ENST00000491075 TRBV7-1A0A0A6YYK4 115 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 C8orf88P0DMB2 117 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 HIST1H1DP16402 221 aaKnown RBP15.34■□□□□ 0.05
CLIP2-208ENST00000491075 GALP22466 123 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 PSMA1P25786 263 aaKnown RBP15.34■□□□□ 0.05
CLIP2-208ENST00000491075 PSMB6P28072 239 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 PLA2G7Q13093 441 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 SSX1Q16384 188 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 OR2B11Q5JQS5 317 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 VKORC1L1Q8N0U8 176 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 OR4S2Q8NH73 311 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 TMEM167AQ8TBQ9 72 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 OR2A7Q96R45 310 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 SPAG8Q99932 426 aaPredicted RBP15.34■□□□□ 0.05
CLIP2-208ENST00000491075 MRPL27Q9P0M9 148 aaKnown RBP15.34■□□□□ 0.05
CLIP2-208ENST00000491075 V9GY05 133 aa15.34■□□□□ 0.05
CLIP2-208ENST00000491075 A0A075B6Q4 140 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 KIR2DL5BA0A0G2JN68 375 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 KIR2DL5BA0A0G2JPC4 375 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 E7EUB6 86 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 SLC22A5O76082 557 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 AREGP15514 252 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 CALRP27797 417 aaKnown RBP15.33■□□□□ 0.04
CLIP2-208ENST00000491075 TALDO1P37837 337 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 PSMD7P51665 324 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 ELLP55199 621 aaPredicted RBP15.33■□□□□ 0.04
CLIP2-208ENST00000491075 UNQ9165/PRO28630Q6UXU0 137 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 PUSL1Q8N0Z8 303 aaKnown RBP15.33■□□□□ 0.04
CLIP2-208ENST00000491075 KIR2DL5AQ8N109 375 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 KIR2DL5BQ8NHK3 375 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 PHLDA1Q8WV24 401 aaPredicted RBP15.33■□□□□ 0.04
CLIP2-208ENST00000491075 RNF183Q96D59 192 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 CXorf58Q96LI9 332 aa15.33■□□□□ 0.04
CLIP2-208ENST00000491075 A0A1B0GW64 132 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 PTGES3LE9PB15 166 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 CTRB1P17538 263 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 RPS25P62851 125 aaKnown RBP15.32■□□□□ 0.04
CLIP2-208ENST00000491075 RPL30P62888 115 aaKnown RBP15.32■□□□□ 0.04
CLIP2-208ENST00000491075 ZNF585BQ52M93 769 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 HES5Q5TA89 166 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 CTRB2Q6GPI1 263 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 STPG3Q8N7X2 389 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 RBMX2Q9Y388 322 aaKnown RBP15.32■□□□□ 0.04
CLIP2-208ENST00000491075 UFC1Q9Y3C8 167 aa15.32■□□□□ 0.04
CLIP2-208ENST00000491075 IGLV11-55A0A075B6I3 123 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 IGKV1D-8A0A087WSZ0 117 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 MFSD2BA6NFX1 497 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 RAB27BO00194 218 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 CLEC3BP05452 202 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 DEFA4P12838 97 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 MYOD1P15172 320 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 HSD17B10Q99714 261 aaKnown RBP15.31■□□□□ 0.04
CLIP2-208ENST00000491075 C5orf66Q9H5L9 145 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 OR2W1Q9Y3N9 320 aa15.31■□□□□ 0.04
CLIP2-208ENST00000491075 J3QRK9 145 aa15.3■□□□□ 0.04
CLIP2-208ENST00000491075 HLA-DQB1P01920 261 aa15.3■□□□□ 0.04
CLIP2-208ENST00000491075 DTYMKP23919 212 aa15.3■□□□□ 0.04
CLIP2-208ENST00000491075 IRF3Q14653 427 aa15.3■□□□□ 0.04
CLIP2-208ENST00000491075 TCTEX1D2Q8WW35 142 aa15.3■□□□□ 0.04
CLIP2-208ENST00000491075 UBQLN2Q9UHD9 624 aa15.3■□□□□ 0.04
CLIP2-208ENST00000491075 TSPAN4O14817 238 aa15.29■□□□□ 0.04
CLIP2-208ENST00000491075 CTXN2P0C2S0 81 aa15.29■□□□□ 0.04
CLIP2-208ENST00000491075 HSMCR30P0CW71 290 aa15.29■□□□□ 0.04
CLIP2-208ENST00000491075 RAB6AP20340 208 aa15.29■□□□□ 0.04
CLIP2-208ENST00000491075 GPR183P32249 361 aa15.29■□□□□ 0.04
CLIP2-208ENST00000491075 RPL8P62917 257 aaKnown RBP15.29■□□□□ 0.04
CLIP2-208ENST00000491075 SCN3BQ9NY72 215 aa15.29■□□□□ 0.04
CLIP2-208ENST00000491075 HRASP01112 189 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 IGLV2-14P01704 120 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 REG1AP05451 166 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 NFYAP23511 347 aaPredicted RBP15.28■□□□□ 0.04
CLIP2-208ENST00000491075 CRHBPP24387 322 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 FABP5Q01469 135 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 ARL6IP1Q15041 203 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 ODF3L2Q3SX64 289 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 PLET1Q6UQ28 207 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 ZNF502Q8TBZ5 544 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 VPS13DQ5THJ4 4388 aa15.28■□□□□ 0.04
CLIP2-208ENST00000491075 METTL21EPA6NDL7 271 aa15.27■□□□□ 0.04
CLIP2-208ENST00000491075 HLA-GP17693 338 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms