RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	MAFIP	Q8WZ33	124 aa		11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	RNF183	Q96D59	192 aa		11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	FYTTD1	Q96QD9	318 aa	Known RBP	11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	SPAG8	Q99932	426 aa	Predicted RBP	11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	OR51E2	Q9H255	320 aa		11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	SLC2A9	Q9NRM0	540 aa		11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	KLK9	Q9UKQ9	250 aa		11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	LSM2	Q9Y333	95 aa	Known RBP	11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839		S4R3C0	116 aa		11.33	□□□□□ -0.6
AGAP3-222	ENST00000490839	ARL6IP5	O75915	188 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	IL6R	P08887	468 aa	Predicted RBP	11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	ZNF735	P0CB33	412 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	HIST1H1B	P16401	226 aa	Known RBP	11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	PSMB6	P28072	239 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	MAS1L	P35410	378 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	ARFRP1	Q13795	201 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	C2orf76	Q3KRA6	126 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	UNQ9165/PRO28630	Q6UXU0	137 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839		Q6ZS49	121 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	ZNF645	Q8N7E2	425 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	STPG3	Q8N7X2	389 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	TMEM167A	Q8TBQ9	72 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	UFD1	Q92890	307 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	TMEM203	Q969S6	136 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	OR2A7	Q96R45	310 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	MRPL27	Q9P0M9	148 aa	Known RBP	11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	RAB22A	Q9UL26	194 aa		11.32	□□□□□ -0.6
AGAP3-222	ENST00000490839	TRBV7-1	A0A0A6YYK4	115 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	TMEM272	A0A1B0GTI8	110 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839		A0A1B0GW64	132 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	MFNG	O00587	321 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	AREG	P15514	252 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	CD36	P16671	472 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	GADD45A	P24522	165 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	ELL	P55199	621 aa	Predicted RBP	11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	PLA2G7	Q13093	441 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	SSX1	Q16384	188 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	OR2B11	Q5JQS5	317 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	LIPK	Q5VXJ0	399 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	TMEM91	Q6ZNR0	172 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	VKORC1L1	Q8N0U8	176 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	OR4S2	Q8NH73	311 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	CXorf58	Q96LI9	332 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	C5orf66	Q9H5L9	145 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839	UFC1	Q9Y3C8	167 aa		11.31	□□□□□ -0.6
AGAP3-222	ENST00000490839		E7EUB6	86 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	SLC22A5	O76082	557 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	CLEC3B	P05452	202 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	MYOD1	P15172	320 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	HIST1H1D	P16402	221 aa	Known RBP	11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	GNB3	P16520	340 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	CTRB1	P17538	263 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	MED22	Q15528	200 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	TRAM1	Q15629	374 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	ZNF585B	Q52M93	769 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	CTRB2	Q6GPI1	263 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	PUSL1	Q8N0Z8	303 aa	Known RBP	11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	OR10R2	Q8NGX6	335 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	GATAD1	Q8WUU5	269 aa		11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	RBMX2	Q9Y388	322 aa	Known RBP	11.3	□□□□□ -0.6
AGAP3-222	ENST00000490839	IGLV11-55	A0A075B6I3	123 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839		A0A075B6Q4	140 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	MFSD2B	A6NFX1	497 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	TSPAN4	O14817	238 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	DEFA4	P12838	97 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	PSMA1	P25786	263 aa	Known RBP	11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	CALR	P27797	417 aa	Known RBP	11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	TALDO1	P37837	337 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	PSMD7	P51665	324 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	RPS25	P62851	125 aa	Known RBP	11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	RPL30	P62888	115 aa	Known RBP	11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	ODF3L2	Q3SX64	289 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	UBQLN2	Q9UHD9	624 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839		V9GY05	133 aa		11.29	□□□□□ -0.6
AGAP3-222	ENST00000490839	DNAH6	Q9C0G6	4158 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	IGKV1D-8	A0A087WSZ0	117 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839		J3QRK9	145 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	RAB27B	O00194	218 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	HLA-DQB1	P01920	261 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	DTYMK	P23919	212 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	GPR183	P32249	361 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	RPL8	P62917	257 aa	Known RBP	11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	HES5	Q5TA89	166 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	ZNF502	Q8TBZ5	544 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	TMEM190	Q8WZ59	177 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	HSD17B10	Q99714	261 aa	Known RBP	11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	OR2W1	Q9Y3N9	320 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	VPS13D	Q5THJ4	4388 aa		11.28	□□□□□ -0.6
AGAP3-222	ENST00000490839	IGLV2-14	P01704	120 aa		11.27	□□□□□ -0.61
AGAP3-222	ENST00000490839	HLA-G	P17693	338 aa		11.27	□□□□□ -0.61
AGAP3-222	ENST00000490839	LAMTOR1	Q6IAA8	161 aa		11.27	□□□□□ -0.61
AGAP3-222	ENST00000490839	PLET1	Q6UQ28	207 aa		11.27	□□□□□ -0.61
AGAP3-222	ENST00000490839	TCTEX1D2	Q8WW35	142 aa		11.27	□□□□□ -0.61
AGAP3-222	ENST00000490839	GALNT14	Q96FL9	552 aa		11.27	□□□□□ -0.61
AGAP3-222	ENST00000490839	MFF	Q9GZY8	342 aa		11.27	□□□□□ -0.61
AGAP3-222	ENST00000490839	OR4C46	A6NHA9	309 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	PTGES3L	E9PB15	166 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	HRAS	P01112	189 aa		11.26	□□□□□ -0.61
AGAP3-222	ENST00000490839	REG1A	P05451	166 aa		11.26	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms