RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MCFD2Q8NI22 146 aa11.94□□□□□ -0.5
VPS26A-207ENST00000490696 TMEM167AQ8TBQ9 72 aa11.94□□□□□ -0.5
VPS26A-207ENST00000490696 CD300LFQ8TDQ1 290 aa11.94□□□□□ -0.5
VPS26A-207ENST00000490696 SMIM4Q8WVI0 70 aa11.94□□□□□ -0.5
VPS26A-207ENST00000490696 RCC1LQ96I51 464 aaKnown RBP11.94□□□□□ -0.5
VPS26A-207ENST00000490696 RABL2AQ9UBK7 228 aaPredicted RBP11.94□□□□□ -0.5
VPS26A-207ENST00000490696 RSL24D1Q9UHA3 163 aaKnown RBP11.94□□□□□ -0.5
VPS26A-207ENST00000490696 RABL2BQ9UNT1 228 aa11.94□□□□□ -0.5
VPS26A-207ENST00000490696 H3BUA1 57 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 ZNF701M0R085 212 aaPredicted RBP11.93□□□□□ -0.5
VPS26A-207ENST00000490696 CTDSPLO15194 276 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 HPRT1P00492 218 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 TNFSF8P32971 234 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 TAS2R31P59538 309 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 IL18Q14116 193 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 PDLIM3Q53GG5 364 aaPredicted RBP11.93□□□□□ -0.5
VPS26A-207ENST00000490696 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 LPCAT3Q6P1A2 487 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 LHFPL1Q86WI0 220 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 ARRDC1Q8N5I2 433 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 POC5Q8NA72 575 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 OR4D10Q8NGI6 311 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 MS4A10Q96PG2 267 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 SOSTQ9BQB4 213 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 RSRP1Q9BUV0 290 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 SLA2Q9H6Q3 261 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 PLEKHA2Q9HB19 425 aa11.93□□□□□ -0.5
VPS26A-207ENST00000490696 ACTL6BO94805 426 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 S1PR2O95136 353 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 BRI3O95415 125 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 DUS4LO95620 317 aaKnown RBP11.92□□□□□ -0.5
VPS26A-207ENST00000490696 IFNA6P05013 189 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 IL6RP08887 468 aaPredicted RBP11.92□□□□□ -0.5
VPS26A-207ENST00000490696 APELAP0DMC3 54 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 NQO2P16083 231 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 F2RP25116 425 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 CD40LGP29965 261 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 TPPP2P59282 170 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 TAS2R19P59542 299 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 PHLDA2Q53GA4 152 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 OR4A47Q6IF82 309 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 SLC38A6Q8IZM9 456 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 OR11H1Q8NG94 326 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 DGCR14Q96DF8 476 aaKnown RBP11.92□□□□□ -0.5
VPS26A-207ENST00000490696 PHB2Q99623 299 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 AIFM2Q9BRQ8 373 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 BET1LQ9NYM9 111 aa11.92□□□□□ -0.5
VPS26A-207ENST00000490696 TRGV3P03979 118 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 LGALS1P09382 135 aaKnown RBP11.91□□□□□ -0.5
VPS26A-207ENST00000490696 MAS1LP35410 378 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 STEAP1BQ6NZ63 245 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 ADAD2Q8NCV1 583 aaKnown RBP11.91□□□□□ -0.5
VPS26A-207ENST00000490696 OR1N2Q8NGR9 330 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 OR4A5Q8NH83 315 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 SPIN2AQ99865 258 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 SPIN2BQ9BPZ2 258 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 ALX4Q9H161 411 aaPredicted RBP11.91□□□□□ -0.5
VPS26A-207ENST00000490696 ZNF355PQ9NSJ1 428 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 COMMD9Q9P000 198 aa11.91□□□□□ -0.5
VPS26A-207ENST00000490696 A0A1B0GW64 132 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 TEX22C9J3V5 150 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 E7EUB6 86 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 GSTZ1O43708 216 aaPredicted RBP11.9□□□□□ -0.5
VPS26A-207ENST00000490696 RAB3DO95716 219 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 IGHV3-11P01762 117 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 OR9G9P0C7N8 305 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 ZNF735P0CB33 412 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 RAB25P57735 213 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 RPL8P62917 257 aaKnown RBP11.9□□□□□ -0.5
VPS26A-207ENST00000490696 ZNF616Q08AN1 781 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 HRASLSQ9HDD0 168 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 SLC2A9Q9NRM0 540 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 TMEM140Q9NV12 185 aa11.9□□□□□ -0.5
VPS26A-207ENST00000490696 TRAV3A0A0B4J244 114 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 FABP12A6NFH5 140 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 UPK2O00526 184 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 MPPED1O15442 326 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 RBMXL2O75526 392 aaKnown RBP11.89□□□□□ -0.51
VPS26A-207ENST00000490696 OR8U8P0C7N1 319 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 HLA-GP17693 338 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 S100GP29377 79 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 LPAR6P43657 344 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 RPL27AP46776 148 aaKnown RBP11.89□□□□□ -0.51
VPS26A-207ENST00000490696 FOXB2Q5VYV0 432 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 TBC1D26Q86UD7 250 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 TTC9CQ8N5M4 171 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 TERB2Q8NHR7 220 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 MCRIP2Q9BUT9 160 aaKnown RBP11.89□□□□□ -0.51
VPS26A-207ENST00000490696 FAM212BQ9NTI7 297 aaPredicted RBP11.89□□□□□ -0.51
VPS26A-207ENST00000490696 COA4Q9NYJ1 87 aa11.89□□□□□ -0.51
VPS26A-207ENST00000490696 HMX3A6NHT5 357 aa11.88□□□□□ -0.51
VPS26A-207ENST00000490696 MARCH11A6NNE9 402 aa11.88□□□□□ -0.51
VPS26A-207ENST00000490696 FGF2P09038 288 aa11.88□□□□□ -0.51
VPS26A-207ENST00000490696 MYOD1P15172 320 aa11.88□□□□□ -0.51
VPS26A-207ENST00000490696 PGAM2P15259 253 aa11.88□□□□□ -0.51
VPS26A-207ENST00000490696 RND3P61587 244 aa11.88□□□□□ -0.51
VPS26A-207ENST00000490696 MEF2DQ14814 521 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms