RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 TEX261Q6UWH6 196 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 ST6GAL2Q96JF0 529 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 LILRA1O75019 489 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 ZNF737O75373 536 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 C16orf82Q7Z2V1 217 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 GTF3AQ92664 365 aaKnown RBP12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 MRPL20Q9BYC9 149 aaKnown RBP12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 BPESC1Q9GZL8 116 aa12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 YLPM1P49750 1951 aaKnown RBP12.04□□□□□ -0.48
ARHGEF39-205ENST00000490638 LINC00869P0C866 280 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 OTX1P32242 354 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 TPPP2P59282 170 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 BAGE3Q86Y29 109 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 BAGE2Q86Y30 109 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 SPSB4Q96A44 273 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 RBKSQ9H477 322 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 RD3LP0DJH9 198 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 TNFRSF9Q07011 255 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 HSD17B13Q7Z5P4 300 aaPredicted RBP12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 NR2C2APQ86WQ0 139 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 SELENOHQ8IZQ5 122 aaKnown RBP12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 SPRY4Q9C004 299 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 NPFFR1Q9GZQ6 430 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 LRRK1Q38SD2 2015 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 TRGV3P03979 118 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 CTRB1P17538 263 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 PAX6P26367 422 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 CTRB2Q6GPI1 263 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 COMMD1Q8N668 190 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 FBLN5Q9UBX5 448 aa12.03□□□□□ -0.48
ARHGEF39-205ENST00000490638 A0A1W2PS18 150 aa12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 ZNF250P15622 560 aa12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 IFITM2Q01629 132 aa12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 ATP5G2Q06055 141 aa12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 IGFL2Q6UWQ7 119 aa12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 ZNF525Q8N782 197 aa12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 HIGD1AQ9Y241 93 aa12.02□□□□□ -0.48
ARHGEF39-205ENST00000490638 C17orf98A8MV24 154 aa12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 TP53RKQ96S44 253 aa12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 A6NNC1 897 aa12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 CEACAM4O75871 244 aa12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 MBPP02686 304 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 ATP6V0CP27449 155 aa12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 METTL26Q96S19 204 aa12.02□□□□□ -0.49
ARHGEF39-205ENST00000490638 KCNAB3O43448 404 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 MOSP00540 346 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 H1FOOQ8IZA3 346 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 A0A1W2PPQ1 181 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 KIAA1324LA8MWY0 1029 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 PSPNO60542 156 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 YPEL1O60688 119 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 COL8A2P25067 703 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 RUNX1Q01196 453 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 RPEL1Q2QD12 228 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 IL22RA2Q969J5 263 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 YPEL2Q96QA6 119 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 SLC2A8Q9NY64 477 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 RNASEK-C17orf49H0YIS7 233 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 OR2C1O95371 312 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 OR10C1Q96KK4 312 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 WDR61Q9GZS3 305 aaKnown RBP12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 HSBP1L1C9JCN9 74 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 OR2J3O76001 311 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 GNG4P50150 75 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 ZNF146Q15072 292 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 PHYHIPLQ96FC7 376 aa12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 RSPO3Q9BXY4 272 aaPredicted RBP12.01□□□□□ -0.49
ARHGEF39-205ENST00000490638 F8VVB4 439 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 F8VWA3 439 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 BMPR1BO00238 502 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 MLNRO43193 412 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 RANP62826 216 aaKnown RBP12□□□□□ -0.49
ARHGEF39-205ENST00000490638 HIST1H3AP68431 136 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 ZNF497Q6ZNH5 498 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 FOXL2NBQ6ZUU3 175 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 MARVELD3Q96A59 401 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 OR5AC2Q9NZP5 309 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 ID1P41134 155 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 MORN2Q502X0 79 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 FAM89BQ8N5H3 189 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 ZNF439Q8NDP4 499 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 OR4X2Q8NGF9 303 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 NPIPB3Q92617 1050 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 LRRK2Q5S007 2527 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 CDH23Q9H251 3354 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 TRBV6-7A0A0A0MS04 114 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 LAMTOR1Q6IAA8 161 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 FAM166AQ6J272 317 aa12□□□□□ -0.49
ARHGEF39-205ENST00000490638 ZNF430Q9H8G1 570 aaPredicted RBP12□□□□□ -0.49
ARHGEF39-205ENST00000490638 RPUSD1Q9UJJ7 312 aaKnown RBP12□□□□□ -0.49
ARHGEF39-205ENST00000490638 PXMP4Q9Y6I8 212 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms