RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 CLPSL1A2RUU4 121 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 SFT2D2O95562 160 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 IL5P05113 134 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 H2AFB2P0C5Z0 115 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 OR4E1P0C645 316 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 SAA1P0DJI8 122 aaPredicted RBP9.87□□□□□ -0.83
HDAC1-210ENST00000490081 ERVK-16P61578 105 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 OR4A47Q6IF82 309 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 TMED4Q7Z7H5 227 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 OR2T6Q8NHC8 308 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 LINC01006Q8NI28 216 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 ENKURQ8TC29 256 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 LSM10Q969L4 123 aaKnown RBP9.87□□□□□ -0.83
HDAC1-210ENST00000490081 BEX1Q9HBH7 125 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 SERTAD4Q9NUC0 356 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 NUDT15Q9NV35 164 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 SHPKQ9UHJ6 478 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 FLVCR2Q9UPI3 526 aa9.87□□□□□ -0.83
HDAC1-210ENST00000490081 IGHV7-81A0A0B4J1V7 117 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 C9orf170A2RU37 121 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 UPK2O00526 184 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 FCN1O00602 326 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 ARPC1BO15143 372 aaKnown RBP9.86□□□□□ -0.83
HDAC1-210ENST00000490081 PEX14O75381 377 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 DUS4LO95620 317 aaKnown RBP9.86□□□□□ -0.83
HDAC1-210ENST00000490081 VDAC1P21796 283 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 CX3CL1P78423 397 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 PPP1R1AQ13522 171 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 SP6Q3SY56 376 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 AARDQ4LEZ3 155 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 PLET1Q6UQ28 207 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 Q6ZS46 218 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 LYG2Q86SG7 212 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 SELENOHQ8IZQ5 122 aaKnown RBP9.86□□□□□ -0.83
HDAC1-210ENST00000490081 LGI3Q8N145 548 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.86□□□□□ -0.83
HDAC1-210ENST00000490081 WIPF2Q8TF74 440 aaPredicted RBP9.86□□□□□ -0.83
HDAC1-210ENST00000490081 RBMXL1Q96E39 390 aaKnown RBP9.86□□□□□ -0.83
HDAC1-210ENST00000490081 TMEM68Q96MH6 324 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 WNT10AQ9GZT5 417 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 OR51J1Q9H342 316 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 FKBP11Q9NYL4 201 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 CACFD1Q9UGQ2 172 aa9.86□□□□□ -0.83
HDAC1-210ENST00000490081 AP4M1O00189 453 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 PRAF2O60831 178 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 KRASP01116 189 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 ANXA7P20073 488 aaKnown RBP9.85□□□□□ -0.83
HDAC1-210ENST00000490081 RPL8P62917 257 aaKnown RBP9.85□□□□□ -0.83
HDAC1-210ENST00000490081 SSBP2P81877 361 aaPredicted RBP9.85□□□□□ -0.83
HDAC1-210ENST00000490081 DHRS2Q13268 280 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 PLGLAQ15195 96 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 AKIRIN2Q53H80 203 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 H2BFWTQ7Z2G1 175 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 SLC35E3Q7Z769 313 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 ZNF429Q86V71 674 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 ZNF695Q8IW36 515 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 FOXRED2Q8IWF2 684 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 DMBX1Q8NFW5 382 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 LHFPL5Q8TAF8 219 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 SRSF8Q9BRL6 282 aaKnown RBP9.85□□□□□ -0.83
HDAC1-210ENST00000490081 GON7Q9BXV9 100 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 ZNF430Q9H8G1 570 aaPredicted RBP9.85□□□□□ -0.83
HDAC1-210ENST00000490081 TMEM140Q9NV12 185 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 COA4Q9NYJ1 87 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 ZNF257Q9Y2Q1 563 aa9.85□□□□□ -0.83
HDAC1-210ENST00000490081 TRAV6A0A075B6T7 132 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 SNAPC5O75971 98 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 BRI3O95415 125 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 IGKV1-5P01602 117 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 EGR2P11161 476 aaPredicted RBP9.84□□□□□ -0.83
HDAC1-210ENST00000490081 SLC25A6P12236 298 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 G6PCP35575 357 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 PROK1P58294 105 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 SRSF2Q01130 221 aaKnown RBP9.84□□□□□ -0.83
HDAC1-210ENST00000490081 TMEM267Q0VDI3 215 aaPredicted RBP9.84□□□□□ -0.83
HDAC1-210ENST00000490081 PJVKQ0ZLH3 352 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 FXYD3Q14802 87 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 TRIM16LQ309B1 348 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 C19orf54Q5BKX5 351 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 TMEM268Q5VZI3 342 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 THOC7Q6I9Y2 204 aaKnown RBP9.84□□□□□ -0.83
HDAC1-210ENST00000490081 VKORC1L1Q8N0U8 176 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 SGMS2Q8NHU3 365 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 CHPT1Q8WUD6 406 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 MITD1Q8WV92 249 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 RRNAD1Q96FB5 475 aaKnown RBP9.84□□□□□ -0.83
HDAC1-210ENST00000490081 HSPB9Q9BQS6 159 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 C19orf24Q9BVV8 132 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 TPSG1Q9NRR2 321 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 TMEM14BQ9NUH8 114 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 PRNDQ9UKY0 176 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 TMED3Q9Y3Q3 217 aa9.84□□□□□ -0.83
HDAC1-210ENST00000490081 LINC01548A6NM66 108 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 DBX1A6NMT0 343 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 SNRPGP15A8MWD9 76 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 INMT-MINDY4F8WBC2 141 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 DHFRP00374 187 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 CA2P00918 260 aa9.83□□□□□ -0.84
HDAC1-210ENST00000490081 HLA-AP01891 365 aaKnown RBP9.83□□□□□ -0.84
HDAC1-210ENST00000490081 HLA-GP17693 338 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms