RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 PRR20BP86481 221 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 PRR20AP86496 221 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 PLA2G7Q13093 441 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 C2orf76Q3KRA6 126 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 OR2B11Q5JQS5 317 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 H1FOOQ8IZA3 346 aaPredicted RBP10.33□□□□□ -0.76
VARS-227ENST00000489979 KIR2DL5AQ8N109 375 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 DHRSXQ8N5I4 330 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 BPIFB6Q8NFQ5 453 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 KIR2DL5BQ8NHK3 375 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 FBLIM1Q8WUP2 373 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 FAM3DQ96BQ1 224 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 OR51E2Q9H255 320 aa10.33□□□□□ -0.76
VARS-227ENST00000489979 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
VARS-227ENST00000489979 TMEM272A0A1B0GTI8 110 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 MFSD2BA6NFX1 497 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 DHFRP00374 187 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 CLEC3BP05452 202 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 GNAO1P09471 354 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 ZNF735P0CB33 412 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 GNB3P16520 340 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 PSMB6P28072 239 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 RPL30P62888 115 aaKnown RBP10.32□□□□□ -0.76
VARS-227ENST00000489979 KCTD9Q7L273 389 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 TMEM203Q969S6 136 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 RAB3CQ96E17 227 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 SPAG8Q99932 426 aaPredicted RBP10.32□□□□□ -0.76
VARS-227ENST00000489979 MND1Q9BWT6 205 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 C5orf66Q9H5L9 145 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 PLCXD1Q9NUJ7 323 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 FKBP14Q9NWM8 211 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 DNAH11Q96DT5 4516 aa10.32□□□□□ -0.76
VARS-227ENST00000489979 A0A075B6Q4 140 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 TRBV7-1A0A0A6YYK4 115 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 IGHV3-35A0A0C4DH35 117 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 KBTBD11O94819 623 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 REG1AP05451 166 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 HIST1H1BP16401 226 aaKnown RBP10.31□□□□□ -0.76
VARS-227ENST00000489979 CTRB1P17538 263 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 GALP22466 123 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 NANOS2P60321 138 aaKnown RBP10.31□□□□□ -0.76
VARS-227ENST00000489979 ARFRP1Q13795 201 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 KLK9Q2XQG4 91 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 ODF3L2Q3SX64 289 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 CTRB2Q6GPI1 263 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 TMEM91Q6ZNR0 172 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 C8orf59Q8N0T1 100 aaPredicted RBP10.31□□□□□ -0.76
VARS-227ENST00000489979 ZNF645Q8N7E2 425 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 VSTM2AQ8TAG5 236 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 OR2A7Q96R45 310 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 KLK9Q9UKQ9 250 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 RAB22AQ9UL26 194 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 MRPS7Q9Y2R9 242 aaKnown RBP10.31□□□□□ -0.76
VARS-227ENST00000489979 LSM2Q9Y333 95 aaKnown RBP10.31□□□□□ -0.76
VARS-227ENST00000489979 PRELID3BQ9Y3B1 194 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 UFC1Q9Y3C8 167 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 PKHD1P08F94 4074 aa10.31□□□□□ -0.76
VARS-227ENST00000489979 IGLV11-55A0A075B6I3 123 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 IGKV1D-8A0A087WSZ0 117 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 TSPAN4O14817 238 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 S1PR2O95136 353 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 DEFA4P12838 97 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 FCGR2BP31994 310 aaPredicted RBP10.3□□□□□ -0.76
VARS-227ENST00000489979 GPR183P32249 361 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 MAS1LP35410 378 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 PSMD7P51665 324 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 ELLP55199 621 aaPredicted RBP10.3□□□□□ -0.76
VARS-227ENST00000489979 SPHARQ15513 63 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 LIPKQ5VXJ0 399 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 PUSL1Q8N0Z8 303 aaKnown RBP10.3□□□□□ -0.76
VARS-227ENST00000489979 TMEM167AQ8TBQ9 72 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 UFD1Q92890 307 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 CXorf58Q96LI9 332 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 FBXL17Q9UF56 701 aa10.3□□□□□ -0.76
VARS-227ENST00000489979 RBMX2Q9Y388 322 aaKnown RBP10.3□□□□□ -0.76
VARS-227ENST00000489979 RAB27BO00194 218 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 MFNGO00587 321 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 MYOD1P15172 320 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 CRHBPP24387 322 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 MED22Q15528 200 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 HES5Q5TA89 166 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 PLET1Q6UQ28 207 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 OR10R2Q8NGX6 335 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 OR4S2Q8NH73 311 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 ZNF502Q8TBZ5 544 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 ZNF436Q9C0F3 470 aaPredicted RBP10.29□□□□□ -0.76
VARS-227ENST00000489979 MAP6D1Q9H9H5 199 aa10.29□□□□□ -0.76
VARS-227ENST00000489979 IGLV2-14P01704 120 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 IFNA4P05014 189 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 RPA2P15927 270 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 HIST1H1DP16402 221 aaKnown RBP10.28□□□□□ -0.76
VARS-227ENST00000489979 CD36P16671 472 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 GADD45AP24522 165 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 CALRP27797 417 aaKnown RBP10.28□□□□□ -0.76
VARS-227ENST00000489979 TALDO1P37837 337 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 RPS25P62851 125 aaKnown RBP10.28□□□□□ -0.76
VARS-227ENST00000489979 RBMS2Q15434 407 aaKnown RBP10.28□□□□□ -0.76
VARS-227ENST00000489979 LAMTOR1Q6IAA8 161 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 Q6ZS49 121 aa10.28□□□□□ -0.76
VARS-227ENST00000489979 SSX9Q7RTT3 188 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms