RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 EPM2AB3EWF7 344 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 BET1O15155 118 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 SOX15O60248 233 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 ATP6V1G2O95670 118 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 IGHV3-11P01762 117 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 TMEM50BP56557 158 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 CLDN12P56749 244 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 ARPC4P59998 168 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 TMEM177Q53S58 311 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 PLAC9Q5JTB6 97 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 C22orf42Q6IC83 251 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 OR4A47Q6IF82 309 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 MMD2Q8IY49 270 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 TEX45Q8NA69 505 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 BORCS5Q969J3 196 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 MS4A10Q96PG2 267 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 CLCC1Q96S66 551 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 OR2D2Q9H210 308 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 COA4Q9NYJ1 87 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 OR1A1Q9P1Q5 309 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 ETV7Q9Y603 341 aa5.42□□□□□ -1.54
COL9A1-209ENST00000489861 A0A075B6Q4 140 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 DPPA5A6NC42 116 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 ZNF785A8K8V0 405 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 MFNGO00587 321 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 OR9G9P0C7N8 305 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 HIST1H1BP16401 226 aaKnown RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 GNB3P16520 340 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 KIR2DS2P43631 304 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 CBX5P45973 191 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 MECP2P51608 486 aaKnown RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 GNG2P59768 71 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 NANOS2P60321 138 aaKnown RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 UBE2KP61086 200 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 NDPQ00604 133 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 ANKRD55Q3KP44 614 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 HACD4Q5VWC8 232 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 ZNF343Q6P1L6 599 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 CNIH2Q6PI25 160 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 ZNF773Q6PK81 442 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 GLDNQ6ZMI3 551 aaPredicted RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 BVESQ8NE79 360 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 ACOT12Q8WYK0 555 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 GFI1Q99684 422 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 HDHD3Q9BSH5 251 aaPredicted RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 FAM103A1Q9BTL3 118 aaKnown RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 TINAGL1Q9GZM7 467 aaPredicted RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 KCNK15Q9H427 330 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 DIABLOQ9NR28 239 aa5.41□□□□□ -1.54
COL9A1-209ENST00000489861 TXNL4BQ9NX01 149 aaKnown RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 TECRQ9NZ01 308 aaKnown RBP5.41□□□□□ -1.54
COL9A1-209ENST00000489861 RAB27BO00194 218 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 CSN3P07498 182 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 BMI1P35226 326 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 MAS1LP35410 378 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 TCTAP57738 103 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 LINC00205P59089 165 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 ATP5G2Q06055 141 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 KLF5Q13887 457 aaPredicted RBP5.4□□□□□ -1.54
COL9A1-209ENST00000489861 CDK10Q15131 360 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 MSMO1Q15800 293 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 TNXAQ16473 311 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 CDNFQ49AH0 187 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 SLC16A13Q7RTY0 426 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 H1FOOQ8IZA3 346 aaPredicted RBP5.4□□□□□ -1.54
COL9A1-209ENST00000489861 SPARTQ8N0X7 666 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 ZNF383Q8NA42 475 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 ZBTB34Q8NCN2 500 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 OR5T1Q8NG75 326 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 OR4S2Q8NH73 311 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 C2CD4CQ8TF44 421 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 HSD17B10Q99714 261 aaKnown RBP5.4□□□□□ -1.54
COL9A1-209ENST00000489861 DCUN1D5Q9BTE7 237 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 SDHAF2Q9NX18 166 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 THYN1Q9P016 225 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 DAPK2Q9UIK4 370 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 ADAM30Q9UKF2 790 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 ZNF257Q9Y2Q1 563 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 RRP15Q9Y3B9 282 aaKnown RBP5.4□□□□□ -1.54
COL9A1-209ENST00000489861 OR2W1Q9Y3N9 320 aa5.4□□□□□ -1.54
COL9A1-209ENST00000489861 ANKRD34BA5PLL1 514 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 IGLL5B9A064 214 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 FCN1O00602 326 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 SPRY2O43597 315 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 GGCTO75223 188 aaKnown RBP5.39□□□□□ -1.55
COL9A1-209ENST00000489861 HRASP01112 189 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 IGKV1-16P04430 117 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 EGR2P11161 476 aaPredicted RBP5.39□□□□□ -1.55
COL9A1-209ENST00000489861 SYNJ2BPP57105 145 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 OR10A3P58181 314 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 CATR1Q13166 79 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 EXOSC2Q13868 293 aaKnown RBP5.39□□□□□ -1.55
COL9A1-209ENST00000489861 DEFB135Q30KP9 77 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 KCTD21Q4G0X4 260 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 FAM106AQ4KMX7 169 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 IGSF11Q5DX21 431 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 THOC7Q6I9Y2 204 aaKnown RBP5.39□□□□□ -1.55
COL9A1-209ENST00000489861 SFXN4Q6P4A7 337 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 ZNF66Q6ZN08 573 aa5.39□□□□□ -1.55
COL9A1-209ENST00000489861 KCTD9Q7L273 389 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms