RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 CASTOR1Q8WTX7 329 aa8.65□□□□□ -1.02
TFF3-203ENST00000489676 RAB18Q9NP72 206 aa8.65□□□□□ -1.02
TFF3-203ENST00000489676 TMEM140Q9NV12 185 aa8.65□□□□□ -1.02
TFF3-203ENST00000489676 C1RLQ9NZP8 487 aa8.65□□□□□ -1.02
TFF3-203ENST00000489676 METTL1Q9UBP6 276 aaKnown RBP8.65□□□□□ -1.02
TFF3-203ENST00000489676 SHPKQ9UHJ6 478 aa8.65□□□□□ -1.02
TFF3-203ENST00000489676 FBN1P35555 2871 aaKnown RBP8.64□□□□□ -1.03
TFF3-203ENST00000489676 TRAV3A0A0B4J244 114 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 DUXBA0A1W2PPF3 345 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 FAM181BA6NEQ2 426 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 DBX1A6NMT0 343 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 NCBP2LA6PVI3 153 aaKnown RBP8.64□□□□□ -1.03
TFF3-203ENST00000489676 SNRPGP15A8MWD9 76 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 FGF2P09038 288 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 ERVK-16P61578 105 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 RELBQ01201 579 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 Q6ZS46 218 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 PPP1R27Q86WC6 154 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 Q8N2B8 174 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 VSTM2AQ8TAG5 236 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 LSM10Q969L4 123 aaKnown RBP8.64□□□□□ -1.03
TFF3-203ENST00000489676 MDFIQ99750 246 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 AIFM2Q9BRQ8 373 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 KIAA1456Q9P272 454 aa8.64□□□□□ -1.03
TFF3-203ENST00000489676 IGHV7-81A0A0B4J1V7 117 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 SH2D7A6NKC9 451 aaPredicted RBP8.63□□□□□ -1.03
TFF3-203ENST00000489676 UPK2O00526 184 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 FCN1O00602 326 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 CREBL2O60519 120 aaPredicted RBP8.63□□□□□ -1.03
TFF3-203ENST00000489676 OR2A4O95047 310 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 DHFRP00374 187 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 CA2P00918 260 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 OR9G9P0C7N8 305 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 VDAC1P21796 283 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 AKR1C2P52895 323 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 BLCAPP62952 87 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 SRSF2Q01130 221 aaKnown RBP8.63□□□□□ -1.03
TFF3-203ENST00000489676 PJVKQ0ZLH3 352 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 PRSS8Q16651 343 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 IZUMO4Q1ZYL8 232 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 AARDQ4LEZ3 155 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 LIN54Q6MZP7 749 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 LYZL2Q7Z4W2 148 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 PRIMA1Q86XR5 153 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 ZNF695Q8IW36 515 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 FAM219AQ8IW50 185 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 FOXRED2Q8IWF2 684 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 DMBX1Q8NFW5 382 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 OR4A5Q8NH83 315 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 COQ8AQ8NI60 647 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 OR2A7Q96R45 310 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 HSPB9Q9BQS6 159 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 NPFFR1Q9GZQ6 430 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 RANBP3Q9H6Z4 567 aaPredicted RBP8.63□□□□□ -1.03
TFF3-203ENST00000489676 ZNF430Q9H8G1 570 aaPredicted RBP8.63□□□□□ -1.03
TFF3-203ENST00000489676 ZNF702PQ9H963 129 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 GPN1Q9HCN4 374 aaPredicted RBP8.63□□□□□ -1.03
TFF3-203ENST00000489676 MMP24Q9Y5R2 645 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 ALG5Q9Y673 324 aa8.63□□□□□ -1.03
TFF3-203ENST00000489676 TET2Q6N021 2002 aaPredicted RBP8.63□□□□□ -1.03
TFF3-203ENST00000489676 TENM1Q9UKZ4 2725 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 PIGBOS1A0A0B4J2F0 54 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 C15orf61A6NNL5 157 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 ADAP1O75689 374 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 TSPAN9O75954 239 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 ATG12O94817 140 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 IGHG2P01859 326 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 RPL8P62917 257 aaKnown RBP8.62□□□□□ -1.03
TFF3-203ENST00000489676 C10orf55Q5SWW7 151 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 Q6ZRM9 215 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 C12orf45Q8N5I9 185 aaPredicted RBP8.62□□□□□ -1.03
TFF3-203ENST00000489676 SPATA3Q8NHX4 192 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 PHB2Q99623 299 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 RASL11BQ9BPW5 248 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 TMEM14BQ9NUH8 114 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 TMED3Q9Y3Q3 217 aa8.62□□□□□ -1.03
TFF3-203ENST00000489676 A0A1B0GW64 132 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 CGB1A6NKQ9 187 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 TRIM77I1YAP6 450 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 EGR2P11161 476 aaPredicted RBP8.61□□□□□ -1.03
TFF3-203ENST00000489676 MYOD1P15172 320 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 COMPP49747 757 aaPredicted RBP8.61□□□□□ -1.03
TFF3-203ENST00000489676 CRIP2P52943 208 aaPredicted RBP8.61□□□□□ -1.03
TFF3-203ENST00000489676 OR2B8PP59922 312 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 CX3CL1P78423 397 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 PLGLAQ15195 96 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 C2orf68Q2NKX9 166 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 GGNBP1Q5YKI7 109 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 Q6ZSV7 163 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 MMD2Q8IY49 270 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 TAF15Q92804 592 aaKnown RBP eCLIP8.61□□□□□ -1.03
TFF3-203ENST00000489676 GPR146Q96CH1 333 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 RRNAD1Q96FB5 475 aaKnown RBP8.61□□□□□ -1.03
TFF3-203ENST00000489676 COA4Q9NYJ1 87 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 FOXA2Q9Y261 457 aaPredicted RBP8.61□□□□□ -1.03
TFF3-203ENST00000489676 NSG2Q9Y328 171 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 FBXO7Q9Y3I1 522 aa8.61□□□□□ -1.03
TFF3-203ENST00000489676 MPTX1A8MV57 137 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms