RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 PAFAH1B2P68402 229 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 KLK9Q2XQG4 91 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 ZNF880Q6PDB4 577 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 FAM24BQ8N5W8 94 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 KRTAP1-5Q9BYS1 174 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 KLK9Q9UKQ9 250 aa10.57□□□□□ -0.72
UFD1-209ENST00000489406 IGHV3OR16-13A0A075B7E8 117 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 IGHV3-74A0A0B4J1X5 117 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 OR2T8A6NH00 312 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 DFFBO76075 338 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 RRASP10301 218 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 PRDX6P30041 224 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 RPL27AP46776 148 aaKnown RBP10.56□□□□□ -0.72
UFD1-209ENST00000489406 PLA2G7Q13093 441 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 TMED1Q13445 227 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 FAM90A2PQ658T7 463 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 DEFB107AQ8IZN7 70 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 TMEM116Q8NCL8 245 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 DNAJC9Q8WXX5 260 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 C5orf30Q96GV9 206 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 RDH8Q9NYR8 311 aa10.56□□□□□ -0.72
UFD1-209ENST00000489406 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 J3QRE1 110 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 NAPSAO96009 420 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 PSMD7P51665 324 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 IRF3Q14653 427 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 AWAT2Q6E213 333 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 C6orf201Q7Z4U5 140 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 NEDD4LQ96PU5 975 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 NIPSNAP3BQ9BS92 247 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 OR2D2Q9H210 308 aa10.55□□□□□ -0.72
UFD1-209ENST00000489406 KNCNA6PVL3 124 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 C15orf62A8K5M9 175 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 DNASE2O00115 360 aaPredicted RBP10.54□□□□□ -0.72
UFD1-209ENST00000489406 IFNA5P01569 189 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 ZNF735P0CB33 412 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 PTBP1P26599 531 aaKnown RBP eCLIP10.54□□□□□ -0.72
UFD1-209ENST00000489406 MS4A2Q01362 244 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 TPBGQ13641 420 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 TCF24Q7RTU0 167 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 MFSD4AQ8N468 514 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 JAGN1Q8N5M9 183 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 OR6M1Q8NGM8 313 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 OSR1Q8TAX0 266 aaPredicted RBP10.54□□□□□ -0.72
UFD1-209ENST00000489406 RFKQ969G6 155 aa10.54□□□□□ -0.72
UFD1-209ENST00000489406 SRSF8Q9BRL6 282 aaKnown RBP10.54□□□□□ -0.72
UFD1-209ENST00000489406 HMGB1P1B2RPK0 211 aaPredicted RBP10.53□□□□□ -0.72
UFD1-209ENST00000489406 HLA-DRB3P79483 266 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 CDPF1Q6NVV7 123 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 MOB1BQ7L9L4 216 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 ADGRG5Q8IZF4 528 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 GPR148Q8TDV2 347 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 MS4A6AQ9H2W1 248 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 DKK2Q9UBU2 259 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 LINC00588Q9Y4M8 146 aa10.53□□□□□ -0.72
UFD1-209ENST00000489406 CCL18P55774 89 aa10.52□□□□□ -0.73
UFD1-209ENST00000489406 FAM222AQ5U5X8 452 aa10.52□□□□□ -0.73
UFD1-209ENST00000489406 VKORC1L1Q8N0U8 176 aa10.52□□□□□ -0.73
UFD1-209ENST00000489406 ACBD7Q8N6N7 88 aa10.52□□□□□ -0.73
UFD1-209ENST00000489406 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
UFD1-209ENST00000489406 DCUN1D5Q9BTE7 237 aa10.52□□□□□ -0.73
UFD1-209ENST00000489406 OR51E2Q9H255 320 aa10.52□□□□□ -0.73
UFD1-209ENST00000489406 Q9H8V8 135 aa10.52□□□□□ -0.73
UFD1-209ENST00000489406 IGKV1-6A0A0C4DH72 117 aa10.51□□□□□ -0.73
UFD1-209ENST00000489406 LINC00473A8K010 186 aa10.51□□□□□ -0.73
UFD1-209ENST00000489406 MAS1LP35410 378 aa10.51□□□□□ -0.73
UFD1-209ENST00000489406 GTF2A1P52655 376 aaPredicted RBP10.51□□□□□ -0.73
UFD1-209ENST00000489406 ATP6AP1Q15904 470 aa10.51□□□□□ -0.73
UFD1-209ENST00000489406 TTC32Q5I0X7 151 aa10.51□□□□□ -0.73
UFD1-209ENST00000489406 DEFB104AQ8WTQ1 72 aa10.51□□□□□ -0.73
UFD1-209ENST00000489406 CANT1Q8WVQ1 401 aa10.51□□□□□ -0.73
UFD1-209ENST00000489406 HDHD3Q9BSH5 251 aaPredicted RBP10.51□□□□□ -0.73
UFD1-209ENST00000489406 TMEM189A5PLL7 270 aa10.5□□□□□ -0.73
UFD1-209ENST00000489406 RAB27BO00194 218 aa10.5□□□□□ -0.73
UFD1-209ENST00000489406 IGFBP3P17936 291 aaPredicted RBP10.5□□□□□ -0.73
UFD1-209ENST00000489406 DUTP33316 252 aaKnown RBP10.5□□□□□ -0.73
UFD1-209ENST00000489406 ACTL10Q5JWF8 245 aa10.5□□□□□ -0.73
UFD1-209ENST00000489406 UBE2UQ5VVX9 321 aa10.5□□□□□ -0.73
UFD1-209ENST00000489406 SPSB3Q6PJ21 355 aa10.5□□□□□ -0.73
UFD1-209ENST00000489406 ZNF414Q96IQ9 312 aa10.5□□□□□ -0.73
UFD1-209ENST00000489406 XCL2Q9UBD3 114 aa10.5□□□□□ -0.73
UFD1-209ENST00000489406 LRP2P98164 4655 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 IGHV3-21A0A0B4J1V1 117 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 RPS10-NUDT3A0A1W2PQS6 291 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 EREGO14944 169 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 NUPL2O15504 423 aaKnown RBP10.49□□□□□ -0.73
UFD1-209ENST00000489406 NUDT3O95989 172 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 RPL11P62913 178 aaKnown RBP10.49□□□□□ -0.73
UFD1-209ENST00000489406 OR2G6Q5TZ20 316 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 SYS1Q8N2H4 156 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 OR8J1Q8NGP2 316 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 VN1R17PQ8TDU5 208 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 MRPL48Q96GC5 212 aaKnown RBP10.49□□□□□ -0.73
UFD1-209ENST00000489406 IMPAD1Q9NX62 359 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 THYN1Q9P016 225 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 RABAC1Q9UI14 185 aa10.49□□□□□ -0.73
UFD1-209ENST00000489406 FAT3Q8TDW7 4589 aa10.48□□□□□ -0.73
UFD1-209ENST00000489406 TRAV8-7A0A075B6U6 113 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms