RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 C4orf36Q96KX1 117 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 MYCBPQ99417 103 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-233ENST00000489352 ZNF184Q99676 751 aaPredicted RBP8.12□□□□□ -1.11
HDAC6-233ENST00000489352 C1QTNF4Q9BXJ3 329 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 RIBC2Q9H4K1 309 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 Q9H8V8 135 aa8.12□□□□□ -1.11
HDAC6-233ENST00000489352 IGHV3-49A0A0A0MS15 119 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 IGHV7-4-1A0A0J9YVY3 117 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 TEX22C9J3V5 150 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 CYB5BO43169 146 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 CRYGCP07315 174 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 SAA1P0DJI8 122 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-233ENST00000489352 PTBP1P26599 531 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDAC6-233ENST00000489352 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 NUTF2P61970 127 aaKnown RBP8.11□□□□□ -1.11
HDAC6-233ENST00000489352 HAMPP81172 84 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 CLINT1Q14677 625 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 SPSB3Q6PJ21 355 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 MOB1BQ7L9L4 216 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 MFSD4AQ8N468 514 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 CSNK1G2-AS1Q8NCQ2 148 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 BSCL2Q96G97 398 aaPredicted RBP8.11□□□□□ -1.11
HDAC6-233ENST00000489352 PDCD1LG2Q9BQ51 273 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 FAAP24Q9BTP7 215 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 GHRLQ9UBU3 117 aa8.11□□□□□ -1.11
HDAC6-233ENST00000489352 ATP8B1O43520 1251 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 YIF1AO95070 293 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-233ENST00000489352 AREGP15514 252 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 ERVFC1-1P60608 527 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 EFNB1P98172 346 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 TMED1Q13445 227 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 USF2Q15853 346 aaPredicted RBP8.1□□□□□ -1.11
HDAC6-233ENST00000489352 FAM222AQ5U5X8 452 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 AWAT2Q6E213 333 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 TCF24Q7RTU0 167 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 SVOPQ8N4V2 548 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 JAGN1Q8N5M9 183 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 MUL1Q969V5 352 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 OR2D2Q9H210 308 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 RABAC1Q9UI14 185 aa8.1□□□□□ -1.11
HDAC6-233ENST00000489352 RBM7Q9Y580 266 aaKnown RBP8.1□□□□□ -1.11
HDAC6-233ENST00000489352 IGLV11-55A0A075B6I3 123 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 TCRBV5S2A0A599 114 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 IL6RP08887 468 aaPredicted RBP8.09□□□□□ -1.11
HDAC6-233ENST00000489352 IRF3Q14653 427 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 ACTL10Q5JWF8 245 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 SIGIRRQ6IA17 410 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 DHFR2Q86XF0 187 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 DUSP18Q8NEJ0 188 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 OR6M1Q8NGM8 313 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 GPR148Q8TDV2 347 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 ADTRPQ96IZ2 230 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 KRTAP9-2Q9BYQ4 174 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 OR51E2Q9H255 320 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 MS4A6AQ9H2W1 248 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 SDHAF2Q9NX18 166 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 RDH8Q9NYR8 311 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 DKK2Q9UBU2 259 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 MGAT4AQ9UM21 535 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 LINC00588Q9Y4M8 146 aa8.09□□□□□ -1.11
HDAC6-233ENST00000489352 PUS1Q9Y606 427 aaKnown RBP eCLIP8.09□□□□□ -1.11
HDAC6-233ENST00000489352 IGHV3OR16-13A0A075B7E8 117 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 TRAV14DV4A0A0A6YYC5 116 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 IGHV3-74A0A0B4J1X5 117 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 A0A1W2PPQ1 181 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 SMIM9A6NGZ8 99 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 KNCNA6PVL3 124 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 OXTP01178 125 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 GCSHP23434 173 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 DAD1P61803 113 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 OXA1LQ15070 435 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 RNASE12Q5GAN4 147 aaKnown RBP8.08□□□□□ -1.12
HDAC6-233ENST00000489352 UBE2UQ5VVX9 321 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 UBAC2Q8NBM4 344 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 CYYR1Q96J86 154 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 Q96M66 194 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 SRSF8Q9BRL6 282 aaKnown RBP8.08□□□□□ -1.12
HDAC6-233ENST00000489352 RIMS4Q9H426 269 aaPredicted RBP8.08□□□□□ -1.12
HDAC6-233ENST00000489352 IMPAD1Q9NX62 359 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 XCL2Q9UBD3 114 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 CKLFQ9UBR5 152 aa8.08□□□□□ -1.12
HDAC6-233ENST00000489352 IGHV3OR16-12A0A075B7B8 117 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 KRTAP9-6A0A140TA67 174 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 ST8SIA3O43173 380 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 ZNF735P0CB33 412 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 GNRHRP30968 328 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 MAS1LP35410 378 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 HLA-DRB3P79483 266 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 FAM90A2PQ658T7 463 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 C12orf73Q69YU5 71 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 CGB2Q6NT52 195 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 SSX7Q7RTT5 188 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 C6orf201Q7Z4U5 140 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 VSTM2AQ8TAG5 236 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 VN1R17PQ8TDU5 208 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 Q9H3A6 140 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 RFNGQ9Y644 331 aa8.07□□□□□ -1.12
HDAC6-233ENST00000489352 ZAR1LA6NP61 321 aa8.06□□□□□ -1.12
HDAC6-233ENST00000489352 E7EUB6 86 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms