RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 CTAG1AP78358 180 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 IFITM2Q01629 132 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 EDDM3AQ14507 147 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 TMED2Q15363 201 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 ACOT6Q3I5F7 207 aaPredicted RBP1.38□□□□□ -2.19
RFC4-213ENST00000489028 TNFAIP8L3Q5GJ75 292 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 C2orf91Q6ZV80 131 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 ZNF767PQ75MW2 155 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 CLDND2Q8NHS1 167 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 SMCR5Q8TEV8 140 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 RNASE6Q93091 150 aaKnown RBP1.38□□□□□ -2.19
RFC4-213ENST00000489028 KRTAP4-1Q9BYQ7 146 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 ULBP3Q9BZM4 244 aa1.38□□□□□ -2.19
RFC4-213ENST00000489028 RSL24D1Q9UHA3 163 aaKnown RBP1.38□□□□□ -2.19
RFC4-213ENST00000489028 ZNF638Q14966 1978 aaKnown RBP1.38□□□□□ -2.19
RFC4-213ENST00000489028 GRIN2BQ13224 1484 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 SMIM9A6NGZ8 99 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 KNCNA6PVL3 124 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 ODF3BA8MYP8 253 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 C2orf74A8MZ97 194 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 INMT-MINDY4F8WBC2 141 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 PLA2G10O15496 165 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 GNRH2O43555 120 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 SRP19P09132 144 aaKnown RBP1.37□□□□□ -2.19
RFC4-213ENST00000489028 GABRA4P48169 554 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 RAB13P51153 203 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 RANP62826 216 aaKnown RBP1.37□□□□□ -2.19
RFC4-213ENST00000489028 RPL30P62888 115 aaKnown RBP1.37□□□□□ -2.19
RFC4-213ENST00000489028 BASP1P80723 227 aaKnown RBP1.37□□□□□ -2.19
RFC4-213ENST00000489028 TNFRSF9Q07011 255 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 GRK1Q15835 563 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 MIAQ16674 131 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 Q6ZS52 159 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 LHFPL1Q86WI0 220 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 PACRGLQ8N7B6 248 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 OR5B17Q8NGF7 314 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 OR4X1Q8NH49 305 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 ACOT12Q8WYK0 555 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 FGF13Q92913 245 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 MRPS24Q96EL2 167 aaKnown RBP1.37□□□□□ -2.19
RFC4-213ENST00000489028 PRAP1Q96NZ9 151 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 TRIM4Q9C037 500 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 PRTFDC1Q9NRG1 225 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 NDUFB11Q9NX14 153 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 GLTPQ9NZD2 209 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 FBXO5Q9UKT4 447 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 FAM215AQ9Y5M1 114 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 PLXNB1O43157 2135 aa1.37□□□□□ -2.19
RFC4-213ENST00000489028 DICER1Q9UPY3 1922 aaKnown RBP1.36□□□□□ -2.19
RFC4-213ENST00000489028 FLT4P35916 1363 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 ABCC12Q96J65 1359 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 TRGV5A0A0B4J1U4 118 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 TMEM269A0A1B0GVZ9 245 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 SDHAF1A6NFY7 115 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 C11orf86A6NJI1 115 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 A8MUN3 132 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 BHLHE40O14503 412 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 FADS1O60427 444 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 CREBL2O60519 120 aaPredicted RBP1.36□□□□□ -2.19
RFC4-213ENST00000489028 TTRP02766 147 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 ZNF728P0DKX0 622 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 HIST1H1TP22492 207 aaPredicted RBP1.36□□□□□ -2.19
RFC4-213ENST00000489028 HSD11B1P28845 292 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 ALDH3A1P30838 453 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 S100A7P31151 101 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 CSN1S1P47710 185 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 PSMD8P48556 350 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 EMP1P54849 157 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 HIST1H3AP68431 136 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 H3F3AP84243 136 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 TMEM97Q5BJF2 176 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 PABPC1L2AQ5JQF8 200 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 ALKAL1Q6UXT8 129 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 SSX8Q7RTT4 187 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 OR2T4Q8NH00 348 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 OR5J2Q8NH18 312 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 ZNF675Q8TD23 568 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 BORCS7Q96B45 105 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 BTF3L4Q96K17 158 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 CMSS1Q9BQ75 279 aaKnown RBP1.36□□□□□ -2.19
RFC4-213ENST00000489028 ZNF471Q9BX82 626 aaPredicted RBP1.36□□□□□ -2.19
RFC4-213ENST00000489028 COMMD5Q9GZQ3 224 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 TRPM3Q9HCF6 1732 aaPredicted RBP1.36□□□□□ -2.19
RFC4-213ENST00000489028 IL20Q9NYY1 176 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 DOK5Q9P104 306 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 CCL26Q9Y258 94 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 ARL2BPQ9Y2Y0 163 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 ATG2BQ96BY7 2078 aa1.36□□□□□ -2.19
RFC4-213ENST00000489028 NCOA1Q15788 1441 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 TRBV20OR9-2A0A075B6H5 130 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 A0A0J9YW62 118 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 MDFIC2A0A1B0GVS7 189 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 I3L521 148 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 NOS1APO75052 506 aaPredicted RBP1.35□□□□□ -2.19
RFC4-213ENST00000489028 HAND1O96004 215 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 HLA-DRB1P01911 266 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 NEFHP12036 1026 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 PSMB8P28062 276 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 CA5AP35218 305 aa1.35□□□□□ -2.19
RFC4-213ENST00000489028 FUSP35637 526 aaKnown RBP eCLIP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms