RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 C1orf122Q6ZSJ8 110 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 REC114Q7Z4M0 266 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 VMO1Q7Z5L0 202 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 BEND2Q8NDZ0 799 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 OR4P4Q8NGL7 312 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 OR13D1Q8NGV5 346 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 CD300LFQ8TDQ1 290 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 TMEM186Q96B77 213 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 SIRPDQ9H106 197 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 KPTNQ9Y664 436 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 PIGBOS1A0A0B4J2F0 54 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 H0YIZ8 118 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 RBFOX2O43251 390 aaKnown RBP eCLIP8.87□□□□□ -0.99
COL21A1-211ENST00000488912 SCGB1D2O95969 90 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 PRRX1P54821 245 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 S100A10P60903 97 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 FABP9Q0Z7S8 132 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 ZNF345Q14585 488 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 HCP5Q6MZN7 132 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 FAM71F2Q6NXP2 309 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 Q6ZRM9 215 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 FOXRED2Q8IWF2 684 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 OR4D5Q8NGN0 318 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 OR1S2Q8NGQ3 325 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 LSM10Q969L4 123 aaKnown RBP8.87□□□□□ -0.99
COL21A1-211ENST00000488912 GPR146Q96CH1 333 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 RRNAD1Q96FB5 475 aaKnown RBP8.87□□□□□ -0.99
COL21A1-211ENST00000488912 ADTRPQ96IZ2 230 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 SPIN2AQ99865 258 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 SPIN2BQ9BPZ2 258 aa8.87□□□□□ -0.99
COL21A1-211ENST00000488912 POLR3KQ9Y2Y1 108 aaPredicted RBP8.87□□□□□ -0.99
COL21A1-211ENST00000488912 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.86□□□□□ -0.99
COL21A1-211ENST00000488912 BUB1B-PAK6H3BSN5 160 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 MMP9P14780 707 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 SLC25A16P16260 332 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 KIR2DS2P43631 304 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 SSX2Q16385 188 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 ZNF546Q86UE3 836 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 OR11H6Q8NGC7 330 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 OR4S2Q8NH73 311 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 PCGF1Q9BSM1 259 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 GGACTQ9BVM4 153 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 UNKLQ9H9P5 680 aaKnown RBP8.86□□□□□ -0.99
COL21A1-211ENST00000488912 PLEKHA2Q9HB19 425 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 CACNG5Q9UF02 275 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 MARCH11A6NNE9 402 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 FGF16O43320 207 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 TXNL1O43396 289 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 BCL2L11O43521 198 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 HPRT1P00492 218 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 MBPP02686 304 aaPredicted RBP8.86□□□□□ -0.99
COL21A1-211ENST00000488912 ARG1P05089 322 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 OR8U8P0C7N1 319 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 P0C879 139 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 HOXB4P17483 251 aaPredicted RBP8.86□□□□□ -0.99
COL21A1-211ENST00000488912 USF1P22415 310 aaPredicted RBP8.86□□□□□ -0.99
COL21A1-211ENST00000488912 IL3RAP26951 378 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 DVL1P1P54792 670 aaPredicted RBP8.86□□□□□ -0.99
COL21A1-211ENST00000488912 BLOC1S1P78537 153 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 DNLZQ5SXM8 178 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 TGIF2LXQ8IUE1 241 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 LRRC75A-AS1Q8N1F1 130 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 R3HDM4Q96D70 268 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 C2orf88Q9BSF0 95 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 RNF126Q9BV68 326 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 OR5AC2Q9NZP5 309 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 UNC79Q9P2D8 2635 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 TNFSF18Q9UNG2 199 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 MMP24Q9Y5R2 645 aa8.86□□□□□ -0.99
COL21A1-211ENST00000488912 CR1P17927 2039 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 A0A096LNT2 108 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 RNASEK-C17orf49H0YIS7 233 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 H0YJW9 148 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 TOX4O94842 621 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 OR2F2O95006 317 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 NXPH3O95157 252 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 IFNA10P01566 189 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 IGKV1-16P04430 117 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 SLC25A4P12235 298 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 OR2F1Q13607 317 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 Q5PR19 223 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 LDLRAD2Q5SZI1 272 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 VKORC1L1Q8N0U8 176 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 TBX15Q96SF7 602 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 NABP2Q9BQ15 211 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 SMCO4Q9NRQ5 59 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 SLC35D1Q9NTN3 355 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 CBY1Q9Y3M2 126 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 LSM5Q9Y4Y9 91 aaKnown RBP8.85□□□□□ -0.99
COL21A1-211ENST00000488912 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 CELSR1Q9NYQ6 3014 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 A0A1B0GU03 582 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 RNF222A6NCQ9 220 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 ODF3BA8MYP8 253 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 K7EPK0 472 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 KCNAB3O43448 404 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 PITX3O75364 302 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 RAB2AP61019 212 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 RTL8BQ17RB0 113 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 CXorf66Q5JRM2 361 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms