RNA–Protein interactions for RNA: ENST00000487647.5

FGFR1-222, Transcript of fibroblast growth factor receptor 1, human

TSL 1 (best)

Gene FGFR1, Length 1,608 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-222	ENST00000487647	TSNAX	Q99598	290 aa	Known RBP	11.92	□□□□□ -0.5
FGFR1-222	ENST00000487647	SMIM3	Q9BZL3	60 aa		11.92	□□□□□ -0.5
FGFR1-222	ENST00000487647	HIPK2	Q9H2X6	1198 aa		11.92	□□□□□ -0.5
FGFR1-222	ENST00000487647	NUP50	Q9UKX7	468 aa		11.92	□□□□□ -0.5
FGFR1-222	ENST00000487647	STRAP	Q9Y3F4	350 aa	Known RBP	11.92	□□□□□ -0.5
FGFR1-222	ENST00000487647	MINOS1-NBL1	R4GNA1	71 aa		11.92	□□□□□ -0.5
FGFR1-222	ENST00000487647	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	SRRM4	A7MD48	611 aa	Known RBP	11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	KBTBD11	O94819	623 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	SLC25A16	P16260	332 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	USF1	P22415	310 aa	Predicted RBP	11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	DVL1P1	P54792	670 aa	Predicted RBP	11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	RPS16	P62249	146 aa	Known RBP	11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	SPANXN5	Q5MJ07	72 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	OR5C1	Q8NGR4	320 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	OR5B3	Q8NH48	314 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	PERP	Q96FX8	193 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	BEX4	Q9NWD9	120 aa	Predicted RBP	11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	AKAP6	Q13023	2319 aa		11.91	□□□□□ -0.5
FGFR1-222	ENST00000487647	LINC00862	A6NCI5	91 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	CST7	O76096	145 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	TOX4	O94842	621 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	OR2B8P	P59922	312 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	VMA21	Q3ZAQ7	101 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	CLEC9A	Q6UXN8	241 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	MOB3B	Q86TA1	216 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	PDZD9	Q8IXQ8	264 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	TMEM167A	Q8TBQ9	72 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	BSCL2	Q96G97	398 aa	Predicted RBP	11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	ATP5S	Q99766	215 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	GINS3	Q9BRX5	216 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	WFDC1	Q9HC57	220 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	MMP26	Q9NRE1	261 aa		11.9	□□□□□ -0.5
FGFR1-222	ENST00000487647	TRAV3	A0A0B4J244	114 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	IGHV4-61	A0A0C4DH41	118 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	NMB	P08949	121 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	SEC11B	P0C7V7	166 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	SAA1	P0DJI8	122 aa	Predicted RBP	11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	CD1B	P29016	333 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	DYNLT3	P51808	116 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	DLX1	P56177	255 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	ATP5I	P56385	69 aa	Predicted RBP	11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	ATP6V1F	Q16864	119 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	CCDC144NL	Q6NUI1	221 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	LRRC75A-AS1	Q8N1F1	130 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	TEX45	Q8NA69	505 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	RNF141	Q8WVD5	230 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	ENY2	Q9NPA8	101 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	TCF19	Q9Y242	345 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	TBL2	Q9Y4P3	447 aa	Known RBP	11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	OR51B2	Q9Y5P1	312 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	CHD6	Q8TD26	2715 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647		H3BP45	60 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	IGLV2-23	P01705	113 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	HOXB4	P17483	251 aa	Predicted RBP	11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	VDAC2	P45880	294 aa	Predicted RBP	11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	UBE2E1	P51965	193 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	LGALS4	P56470	323 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	PAX8	Q06710	450 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	HABP2	Q14520	560 aa	Predicted RBP	11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	CLINT1	Q14677	625 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	SLC7A5P1	Q8MH63	180 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	TMEM217	Q8N7C4	229 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	PINX1	Q96BK5	328 aa	Known RBP	11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	LPAR2	Q9HBW0	351 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	MED9	Q9NWA0	146 aa		11.89	□□□□□ -0.51
FGFR1-222	ENST00000487647	IGHV4-30-2	A0A087WSY4	118 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647		A0A1W2PPI3	338 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	FAM157A	C9JC47	383 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	RNASEK-C17orf49	H0YIS7	233 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	IFNA5	P01569	189 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	METTL15P1	P0C7V9	234 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	RPL8	P62917	257 aa	Known RBP	11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	PRCD	Q00LT1	54 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	CLEC12B	Q2HXU8	276 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	TMED6	Q8WW62	240 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	ZDHHC16	Q969W1	377 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	PARD6G	Q9BYG4	376 aa	Predicted RBP	11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	COMMD5	Q9GZQ3	224 aa		11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	HEYL	Q9NQ87	328 aa	Predicted RBP	11.88	□□□□□ -0.51
FGFR1-222	ENST00000487647	INS-IGF2	F8WCM5	200 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	FGF16	O43320	207 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	SPP1	P10451	314 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	HOXA1	P49639	335 aa	Predicted RBP	11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	OR10P1	Q8NGE3	313 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	NRGN	Q92686	78 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	OR4C12	Q96R67	309 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	TBX15	Q96SF7	602 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	DCHS2	Q6V1P9	2916 aa		11.87	□□□□□ -0.51
FGFR1-222	ENST00000487647	MAS1L	P35410	378 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	RAB5C	P51148	216 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	PRB3	Q04118	309 aa	Predicted RBP	11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	KLRD1	Q13241	179 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	OR1L8	Q8NGR8	309 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	MALSU1	Q96EH3	234 aa		11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	SAT2	Q96F10	170 aa	Predicted RBP	11.86	□□□□□ -0.51
FGFR1-222	ENST00000487647	PSMG3-AS1	Q96PY0	264 aa		11.86	□□□□□ -0.51

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