RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 PPP1CCP36873 323 aaKnown RBP2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 OR3A3P47888 321 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 ADARB1P78563 741 aaKnown RBP2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 NDPQ00604 133 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 HAGHQ16775 308 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 ECSCRQ19T08 205 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 LRRC36Q1X8D7 754 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 MOGAT2Q3SYC2 334 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 Q499Y3 187 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 ACTBL2Q562R1 376 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 C6orf141Q5SZD1 244 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 XAF1Q6GPH4 301 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 UNQ5815/PRO19632Q6UWF5 114 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 GLIPR1L1Q6UWM5 242 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 ZNF562Q6V9R5 426 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 ADAMTSL5Q6ZMM2 481 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 TMPRSS11AQ6ZMR5 421 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 PPP1R27Q86WC6 154 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 OR52I1Q8NGK6 324 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 MRPL30Q8TCC3 161 aaKnown RBP2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 GALMQ96C23 342 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 SMIM19Q96E16 107 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 RDH12Q96NR8 316 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 SELENOIQ9C0D9 397 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 RANGRFQ9HD47 186 aaPredicted RBP2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 BABAM2Q9NXR7 383 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 CNOT2Q9NZN8 540 aaKnown RBP2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 PIPOXQ9P0Z9 390 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 CKLFQ9UBR5 152 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 FBXO7Q9Y3I1 522 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 STARD9Q9P2P6 4700 aa2.98□□□□□ -1.93
SNRNP40-205ENST00000486941 TRAV8-7A0A075B6U6 113 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 A0A0G2JLM5 398 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 LOC100130705A0A1B0GUX0 176 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 IRGMA1A4Y4 181 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 USP17L23D6RBM5 183 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 H0YJW9 148 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 H3BUA1 57 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 ITGB1BP1O14713 200 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 SLC22A1O15245 554 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 PDCD6O75340 191 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 CRTAPO75718 401 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 CIB2O75838 187 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 BRI3O95415 125 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 IGHV3-11P01762 117 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 TRGV3P03979 118 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 MAS1P04201 325 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 CT45A6P0DMU7 189 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 CT45A5P0DMU8 189 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 CT45A7P0DMV0 189 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 MGMTP16455 207 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 NKX2-1P43699 371 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 ETV1P50549 477 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 TPPP2P59282 170 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 RPS11P62280 158 aaKnown RBP eCLIP2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 KLF5Q13887 457 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 GNMTQ14749 295 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 PLGLAQ15195 96 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 PSG5Q15238 335 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 HMGN3Q15651 99 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 YIF1BQ5BJH7 314 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 OR2G6Q5TZ20 316 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 DMKNQ6E0U4 476 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 FAM131AQ6UXB0 335 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 IL34Q6ZMJ4 242 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 C5orf24Q7Z6I8 188 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 CBR4Q8N4T8 237 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 JAGN1Q8N5M9 183 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 LFNGQ8NES3 379 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 CASTOR1Q8WTX7 329 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 APH1BQ8WW43 257 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 GHSRQ92847 366 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 TMEM68Q96MH6 324 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 MS4A10Q96PG2 267 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 UQCC2Q9BRT2 126 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 AGMATQ9BSE5 352 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 IFI27L2Q9H2X8 130 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 FBXL15Q9H469 300 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 BANF2Q9H503 90 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 TUBA4BQ9H853 241 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 SIGLEC8Q9NYZ4 499 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 PTTG2Q9NZH5 202 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 ABRACLQ9P1F3 81 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 GHRLQ9UBU3 117 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 WASHC3Q9Y3C0 194 aa2.97□□□□□ -1.93
SNRNP40-205ENST00000486941 TRBV6-6A0A0A6YYG2 114 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 TEX13DA0A0J9YY54 714 aaPredicted RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 C13orf42A0A1B0GVH6 325 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 H7C2Y5 167 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 WBP4O75554 376 aaKnown RBP2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 BAG2O95816 211 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 NAPSAO96009 420 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 LALBAP00709 142 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 CSN3P07498 182 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 HOXB5P09067 269 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 UBBP0CG47 229 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 MYL12AP19105 171 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 AADACP22760 399 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 CAPGP40121 348 aa2.96□□□□□ -1.94
SNRNP40-205ENST00000486941 MED21Q13503 144 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms