RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 DYNC1I1O14576 645 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 NAPSAO96009 420 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 IL6RP08887 468 aaPredicted RBP5.8□□□□□ -1.48
XRN1-212ENST00000486211 GSTT2P0CG29 244 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 GSTT2BP0CG30 244 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 AREGP15514 252 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 ZNF19P17023 458 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 FUSP35637 526 aaKnown RBP eCLIP5.8□□□□□ -1.48
XRN1-212ENST00000486211 ATP6V1E1P36543 226 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 DAPP51397 102 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 TMED1Q13445 227 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 GPR176Q14439 515 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 FAM90A2PQ658T7 463 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 LEMD1Q68G75 181 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 PLET1Q6UQ28 207 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 TEPPQ6URK8 271 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 ZNF66Q6ZN08 573 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 TRPT1Q86TN4 253 aaKnown RBP5.8□□□□□ -1.48
XRN1-212ENST00000486211 ADGRG5Q8IZF4 528 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.8□□□□□ -1.48
XRN1-212ENST00000486211 OR5AK2Q8NH90 309 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 DNAJC9Q8WXX5 260 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 ZNF414Q96IQ9 312 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 C8orf49Q96NF6 230 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 KRTAP1-5Q9BYS1 174 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 SELENOIQ9C0D9 397 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 RIBC2Q9H4K1 309 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 CLEC5AQ9NY25 188 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 RNF213Q63HN8 5207 aa5.8□□□□□ -1.48
XRN1-212ENST00000486211 LRP1Q07954 4544 aaKnown RBP5.79□□□□□ -1.48
XRN1-212ENST00000486211 IGHV3OR16-8A0A075B7F1 116 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 DAPL1A0PJW8 107 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 K7EMT4 169 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 ZNF207O43670 478 aaKnown RBP5.79□□□□□ -1.48
XRN1-212ENST00000486211 RPSAP08865 295 aaKnown RBP5.79□□□□□ -1.48
XRN1-212ENST00000486211 SAA1P0DJI8 122 aaPredicted RBP5.79□□□□□ -1.48
XRN1-212ENST00000486211 MGMTP16455 207 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 ZBTB25P24278 435 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 BDKRB2P30411 391 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 DEFB131AP59861 70 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 KRTAP10-1P60331 282 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 MS4A2Q01362 244 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 CDK10Q15131 360 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 TMEM88Q6PEY1 159 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 GLIPR1L1Q6UWM5 242 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 ORAI1Q96D31 301 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 CXorf58Q96LI9 332 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 ZNF184Q99676 751 aaPredicted RBP5.79□□□□□ -1.48
XRN1-212ENST00000486211 TMEM14BQ9NUH8 114 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 SDHAF2Q9NX18 166 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 SMPXQ9UHP9 88 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 TMED3Q9Y3Q3 217 aa5.79□□□□□ -1.48
XRN1-212ENST00000486211 IGKV3-7A0A075B6H7 116 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 TRBV5-7A0A0A0MS05 114 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 IGKV1-6A0A0C4DH72 117 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 HMGB1P1B2RPK0 211 aaPredicted RBP5.78□□□□□ -1.48
XRN1-212ENST00000486211 NDUFA4O00483 81 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 GNGT2O14610 69 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 CHEK1O14757 476 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 ACTL6BO94805 426 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 ZNF735P0CB33 412 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 SPP1P10451 314 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 HIST1H1BP16401 226 aaKnown RBP5.78□□□□□ -1.48
XRN1-212ENST00000486211 IGFBP3P17936 291 aaPredicted RBP5.78□□□□□ -1.48
XRN1-212ENST00000486211 MNAT1P51948 309 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 SNRPGP62308 76 aaKnown RBP5.78□□□□□ -1.48
XRN1-212ENST00000486211 RTL8BQ17RB0 113 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 DHFR2Q86XF0 187 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 STHQ8IWL8 128 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 MMD2Q8IY49 270 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 DEFB107AQ8IZN7 70 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 GBGT1Q8N5D6 347 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 FAM24BQ8N5W8 94 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 GIMAP1Q8WWP7 306 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 MUL1Q969V5 352 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 OR2A7Q96R45 310 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 FAAP24Q9BTP7 215 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 RHPN1-AS1Q9BWJ2 59 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 AASSQ9UDR5 926 aa5.78□□□□□ -1.48
XRN1-212ENST00000486211 C15orf62A8K5M9 175 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 CREBL2O60519 120 aaPredicted RBP5.77□□□□□ -1.49
XRN1-212ENST00000486211 CRTAPO75718 401 aaPredicted RBP5.77□□□□□ -1.49
XRN1-212ENST00000486211 DFFBO76075 338 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 CRYZL1O95825 349 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 FAM107AO95990 144 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 SPART-AS1P0CW21 52 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 RRASP10301 218 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 PTBP1P26599 531 aaKnown RBP eCLIP5.77□□□□□ -1.49
XRN1-212ENST00000486211 PPP3R1P63098 170 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 HLA-DRB3P79483 266 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 CBX3Q13185 183 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 ICAM4Q14773 271 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 MOB1BQ7L9L4 216 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 C6orf201Q7Z4U5 140 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 THTPAQ9BU02 230 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 C20orf24Q9BUV8 137 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 KRTAP3-1Q9BYR8 98 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 RDH8Q9NYR8 311 aa5.77□□□□□ -1.49
XRN1-212ENST00000486211 TRBV6-6A0A0A6YYG2 114 aa5.76□□□□□ -1.49
XRN1-212ENST00000486211 IGHV7-4-1A0A0J9YVY3 117 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms