RNA–Protein interactions for RNA: ENST00000486210.1

MCF2L-226, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-226ENST00000486210 HUWE1Q7Z6Z7 4374 aaKnown RBP13.82□□□□□ -0.2
MCF2L-226ENST00000486210 SHOXO15266 292 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 KIR2DS2P43631 304 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 SLC35B1P78383 322 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 PSG5Q15238 335 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 SP6Q3SY56 376 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 MRPL41Q8IXM3 137 aaKnown RBP13.81□□□□□ -0.2
MCF2L-226ENST00000486210 C5orf56Q8N8D9 126 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 POC5Q8NA72 575 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 OR4S2Q8NH73 311 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 HARBI1Q96MB7 349 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 RNF5Q99942 180 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 NAA60Q9H7X0 242 aa13.81□□□□□ -0.2
MCF2L-226ENST00000486210 C3orf85A0A1B0GTC6 90 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 CRYM-AS1A6NIL9 109 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 NUDT19A8MXV4 375 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 ARPC1BO15143 372 aaKnown RBP13.8□□□□□ -0.2
MCF2L-226ENST00000486210 NBR2O15453 112 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 FGF16O43320 207 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 S1PR2O95136 353 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 NDUFA3O95167 84 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 TCRBP04435 133 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 AKR1C4P17516 323 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 LPAR6P43657 344 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 CBX3Q13185 183 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 MZT2BQ6NZ67 158 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 VKORC1L1Q8N0U8 176 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 FAM71E2Q8N5Q1 922 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 FBXL15Q9H469 300 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 TPSG1Q9NRR2 321 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 LIN7CQ9NUP9 197 aaKnown RBP13.8□□□□□ -0.2
MCF2L-226ENST00000486210 DNAH7Q8WXX0 4024 aa13.8□□□□□ -0.2
MCF2L-226ENST00000486210 TEX13DA0A0J9YY54 714 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-226ENST00000486210 FAM240BA0A1B0GVZ2 78 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 H0Y980 276 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 RRHO14718 337 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 RBFOX2O43251 390 aaKnown RBP eCLIP13.79□□□□□ -0.2
MCF2L-226ENST00000486210 IGKV1-39P01597 117 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 IGKV1D-39P04432 117 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 CRYGBP07316 175 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 OR5AC1P0C628 307 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 SUPT4H1P63272 117 aaKnown RBP13.79□□□□□ -0.2
MCF2L-226ENST00000486210 FOXRED2Q8IWF2 684 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 OR8H1Q8NGG4 311 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 OSR1Q8TAX0 266 aaPredicted RBP13.79□□□□□ -0.2
MCF2L-226ENST00000486210 TSNAXQ99598 290 aaKnown RBP13.79□□□□□ -0.2
MCF2L-226ENST00000486210 MCRIP2Q9BUT9 160 aaKnown RBP13.79□□□□□ -0.2
MCF2L-226ENST00000486210 PRR13Q9NZ81 148 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 U3KQK5 164 aa13.79□□□□□ -0.2
MCF2L-226ENST00000486210 FCN1O00602 326 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 SLC25A17O43808 307 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 HPRT1P00492 218 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 RPA2P15927 270 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 ANXA7P20073 488 aaKnown RBP13.78□□□□□ -0.2
MCF2L-226ENST00000486210 LGALS7P47929 136 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 DHODHQ02127 395 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 DCTN2Q13561 401 aaKnown RBP13.78□□□□□ -0.2
MCF2L-226ENST00000486210 C5orf64Q2M2E5 130 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 NRARPQ7Z6K4 114 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 SLC35E3Q7Z769 313 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 ZNF329Q86UD4 541 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 SLC25A42Q86VD7 318 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 CENPSQ8N2Z9 138 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 COMMD1Q8N668 190 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 CD300LFQ8TDQ1 290 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 C20orf85Q9H1P6 137 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 ZFP57Q9NU63 452 aa13.78□□□□□ -0.2
MCF2L-226ENST00000486210 METTL1Q9UBP6 276 aaKnown RBP13.78□□□□□ -0.2
MCF2L-226ENST00000486210 ZMAT5Q9UDW3 170 aaKnown RBP13.78□□□□□ -0.2
MCF2L-226ENST00000486210 TRAV6A0A075B6T7 132 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 NHLRC4P0CG21 123 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-226ENST00000486210 SAA1P0DJI8 122 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-226ENST00000486210 SPNP16150 400 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 DEFA1P59665 94 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 DEFA3P59666 94 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 RPL23AP62750 156 aaKnown RBP13.77□□□□□ -0.21
MCF2L-226ENST00000486210 MRGPRG-AS1Q2M3A8 158 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 SSX9Q7RTT3 188 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 SGPP2Q8IWX5 399 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 TCTEX1D1Q8N7M0 179 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 GLYATL2Q8WU03 294 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 CLCC1Q96S66 551 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 RASL11BQ9BPW5 248 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 PLEKHA2Q9HB19 425 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 FAM212BQ9NTI7 297 aaPredicted RBP13.77□□□□□ -0.21
MCF2L-226ENST00000486210 KIAA1456Q9P272 454 aa13.77□□□□□ -0.21
MCF2L-226ENST00000486210 LINC01548A6NM66 108 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 SPDEFO95238 335 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 UCP1P25874 307 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 TAS2R31P59538 309 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 UBE2KP61086 200 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 PJVKQ0ZLH3 352 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 PPP1R1AQ13522 171 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 TMEM187Q14656 261 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 C18orf65Q6ZTR6 163 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 LHFPL5Q8TAF8 219 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 ENKURQ8TC29 256 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 GALNT14Q96FL9 552 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 HSPB9Q9BQS6 159 aa13.76□□□□□ -0.21
MCF2L-226ENST00000486210 NUDT15Q9NV35 164 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms