RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FCGR2CP31995 323 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 MYCNOSP40205 109 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 RFX2P48378 723 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 TAS2R46P59540 309 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 KRTAP10-11P60412 298 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 RPS16P62249 146 aaKnown RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 SSBP1Q04837 148 aaKnown RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 PRSS8Q16651 343 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 NSUN5P1Q3KNT7 163 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 ZNF585BQ52M93 769 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 C9orf152Q5JTZ5 239 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 C11orf87Q6NUJ2 197 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 MZT2AQ6P582 158 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 ZNF818PQ6ZRF7 136 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 ZNF695Q8IW36 515 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 LAX1Q8IWV1 398 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 OR4D10Q8NGI6 311 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 OR5M8Q8NGP6 311 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 FAM110DQ8TAY7 271 aaPredicted RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 CHAC2Q8WUX2 184 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 C4orf3Q8WVX3 66 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 AP3S1Q92572 193 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 ISOC1Q96CN7 298 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 R3HDM4Q96D70 268 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 FAM103A1Q9BTL3 118 aaKnown RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 ALX4Q9H161 411 aaPredicted RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 GNB4Q9HAV0 340 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 CCL28Q9NRJ3 127 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 KIAA1456Q9P272 454 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 RABL2AQ9UBK7 228 aaPredicted RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 METTL1Q9UBP6 276 aaKnown RBP4.42□□□□□ -1.7
CUX1-208ENST00000485792 KLK11Q9UBX7 282 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 RABL2BQ9UNT1 228 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 DMRT1Q9Y5R6 373 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 A3GALT2U3KPV4 340 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 STAB2Q8WWQ8 2551 aa4.42□□□□□ -1.7
CUX1-208ENST00000485792 HYDINQ4G0P3 5121 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 hCG_2014768A0A024R1R8 64 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 TEX22C9J3V5 150 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 GABARAPH6UMI1 98 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 H7C2Y5 167 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 GSTZ1O43708 216 aaPredicted RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 RAMP3O60896 148 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 PGLYRP1O75594 196 aaPredicted RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 CRYZL1O95825 349 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 CA2P00918 260 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 CRYGCP07315 174 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 P0C879 139 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 ZNF735P0CB33 412 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 SAA1P0DJI8 122 aaPredicted RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 TBPP20226 339 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 RCVRNP35243 200 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 HRH1P35367 487 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 RND3P61587 244 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 MRPS10P82664 201 aaKnown RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 TMEM267Q0VDI3 215 aaPredicted RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 RTL8BQ17RB0 113 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 PYHIN1Q6K0P9 492 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 IDO2Q6ZQW0 420 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 KCTD9Q7L273 389 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 CLVS1Q8IUQ0 354 aaPredicted RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 TTC9CQ8N5M4 171 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 LFNGQ8NES3 379 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 OR52I2Q8NH67 350 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 TMEM167AQ8TBQ9 72 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 C15orf40Q8WUR7 153 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 SMIM4Q8WVI0 70 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 HARBI1Q96MB7 349 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 SLA2Q9H6Q3 261 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 ZNF430Q9H8G1 570 aaPredicted RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 PLEKHA2Q9HB19 425 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 BET1LQ9NYM9 111 aa4.41□□□□□ -1.7
CUX1-208ENST00000485792 FOXA2Q9Y261 457 aaPredicted RBP4.41□□□□□ -1.7
CUX1-208ENST00000485792 TRAV3A0A0B4J244 114 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 SMIM31A0A1B0GVY4 71 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 J3QRK9 145 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 CCL24O00175 119 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 FCGR3BO75015 233 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 KBTBD11O94819 623 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 OR2A4O95047 310 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 DUS4LO95620 317 aaKnown RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 HPRT1P00492 218 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 IGKV1-39P01597 117 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 TRBV12-3P01733 135 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 IGKV1D-39P04432 117 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 VDAC1P21796 283 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 F2RP25116 425 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 MAS1LP35410 378 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 ETV6P41212 452 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 KIR2DS2P43631 304 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 TAS2R31P59538 309 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 ARPC4P59998 168 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 GNB1P62873 340 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 DEFA6Q01524 100 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 ZNF45Q02386 682 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 FXYD3Q14802 87 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 PDLIM3Q53GG5 364 aaPredicted RBP4.4□□□□□ -1.71
CUX1-208ENST00000485792 ACTBL2Q562R1 376 aa4.4□□□□□ -1.71
CUX1-208ENST00000485792 RNASE12Q5GAN4 147 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms