RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 CLEC3BP05452 202 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 CTSDP07339 412 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-210ENST00000485247 OR2T7P0C7T2 308 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 MYOD1P15172 320 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 RPS27AP62979 156 aaKnown RBP3.76□□□□□ -1.81
PTPN4-210ENST00000485247 DLK1P80370 383 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 GK3PQ14409 553 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 LY6G6FQ5SQ64 297 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 LEMD1Q68G75 181 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 DGAT2L7PQ6IED9 249 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 RAB12Q6IQ22 244 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 HACD2Q6Y1H2 254 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 IDO2Q6ZQW0 420 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 C19orf35Q6ZS72 473 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 FAM220AQ7Z4H9 259 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 PDPNQ86YL7 162 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 OR51A2Q8NGJ7 313 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 ACOT12Q8WYK0 555 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 GALMQ96C23 342 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 CPNE2Q96FN4 548 aaPredicted RBP3.76□□□□□ -1.81
PTPN4-210ENST00000485247 NSL1Q96IY1 281 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 METTL9Q9H1A3 318 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 SLC35D1Q9NTN3 355 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 PTTG2Q9NZH5 202 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 TMED3Q9Y3Q3 217 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 PEX16Q9Y5Y5 336 aa3.76□□□□□ -1.81
PTPN4-210ENST00000485247 RNF213Q63HN8 5207 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 IGHV3OR16-8A0A075B7F1 116 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 SRRM4A7MD48 611 aaKnown RBP3.75□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF705EA8MWA4 302 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-210ENST00000485247 BAG2O95816 211 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 ALPLP05186 524 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 GIG44P09565 113 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-210ENST00000485247 GSTT2P0CG29 244 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 GSTT2BP0CG30 244 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 HTN3P15516 51 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 GALP22466 123 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 CMC4P56277 68 aaPredicted RBP3.75□□□□□ -1.81
PTPN4-210ENST00000485247 HAMPP81172 84 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 PRSS8Q16651 343 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 SLC22A6Q4U2R8 563 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 C10orf55Q5SWW7 151 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 AADACL4Q5VUY2 407 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 GLT8D1Q68CQ7 371 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 GAPTQ8N292 157 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 TTC9CQ8N5M4 171 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 PARP16Q8N5Y8 322 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 ZNRF2Q8NHG8 242 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 TMEM163Q8TC26 289 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 EEF1AKMT3Q96AZ1 226 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 FAM210BQ96KR6 192 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 HARBI1Q96MB7 349 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 S100A13Q99584 98 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 ATG101Q9BSB4 218 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 AGMATQ9BSE5 352 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF556Q9HAH1 456 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 PLEKHA2Q9HB19 425 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 SPACA1Q9HBV2 294 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 CLEC5AQ9NY25 188 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 IL36GQ9NZH8 169 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 TBC1D24Q9ULP9 559 aa3.75□□□□□ -1.81
PTPN4-210ENST00000485247 IGKV2D-30A0A075B6S6 120 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 MFSD2BA6NFX1 497 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF207O43670 478 aaKnown RBP3.74□□□□□ -1.81
PTPN4-210ENST00000485247 GPX5O75715 221 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 GTF2F2P13984 249 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 RAB3AP20336 220 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 PRKACGP22612 351 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 GPR183P32249 361 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 ATP6V1E1P36543 226 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 SOX2P48431 317 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF85Q03923 595 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 LIPKQ5VXJ0 399 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 NXNL2Q5VZ03 156 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 TMEM88Q6PEY1 159 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 PLET1Q6UQ28 207 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 SSX9Q7RTT3 188 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 CEACAM19Q7Z692 300 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF554Q86TJ5 538 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 HS3ST5Q8IZT8 346 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 GBGT1Q8N5D6 347 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 C15orf53Q8NAA6 179 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 MPLKIPQ8TAP9 179 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 MRPL30Q8TCC3 161 aaKnown RBP3.74□□□□□ -1.81
PTPN4-210ENST00000485247 TMEM190Q8WZ59 177 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 IL4I1Q96RQ9 567 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 RNF2Q99496 336 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 SPIN2AQ99865 258 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 SPIN2BQ9BPZ2 258 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 C20orf24Q9BUV8 137 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 DAZ1Q9NQZ3 744 aaKnown RBP3.74□□□□□ -1.81
PTPN4-210ENST00000485247 PAK1IP1Q9NWT1 392 aaPredicted RBP3.74□□□□□ -1.81
PTPN4-210ENST00000485247 ABRACLQ9P1F3 81 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF257Q9Y2Q1 563 aa3.74□□□□□ -1.81
PTPN4-210ENST00000485247 IGHV3-49A0A0A0MS15 119 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 DPPA5A6NC42 116 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 OR4C45A6NMZ5 311 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 M0R1X1 148 aa3.73□□□□□ -1.81
PTPN4-210ENST00000485247 ZNF780AO75290 641 aaPredicted RBP3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms