RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 ECSCRQ19T08 205 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 KHDC1LQ5JSQ8 128 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 TMEM65Q6PI78 240 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 UNQ5815/PRO19632Q6UWF5 114 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 IDO2Q6ZQW0 420 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 FAM103A1Q9BTL3 118 aaKnown RBP13.87□□□□□ -0.19
SREBF1-213ENST00000485080 KLK15Q9H2R5 256 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 SLC2A8Q9NY64 477 aa13.87□□□□□ -0.19
SREBF1-213ENST00000485080 H3BUA1 57 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 PF4V1P10720 104 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 RUNX1Q01196 453 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 ZNF79Q15937 498 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 ZNF585BQ52M93 769 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 VKORC1L1Q8N0U8 176 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 ZNF491Q8N8L2 437 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 OR6Q1Q8NGQ2 317 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 GRPEL2Q8TAA5 225 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 DEDD2Q8WXF8 326 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 THAP7Q9BT49 309 aaPredicted RBP13.86□□□□□ -0.19
SREBF1-213ENST00000485080 SLC2A9Q9NRM0 540 aa13.86□□□□□ -0.19
SREBF1-213ENST00000485080 A0A1W2PN81 502 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 DISC1C4P0D8 188 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 ACTL6BO94805 426 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 CHRNA7P36544 502 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 GNB1P62873 340 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 SURF2Q15527 256 aaPredicted RBP13.85□□□□□ -0.19
SREBF1-213ENST00000485080 PHLDA2Q53GA4 152 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 SPANXN2Q5MJ10 180 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 ASPHD1Q5U4P2 390 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 OR4A47Q6IF82 309 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 LCNL1Q6ZST4 164 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 KLHL30-AS1Q8NEE0 82 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 OR4C16Q8NGL9 310 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 ZFAND1Q8TCF1 268 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 C4orf3Q8WVX3 66 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 SRSF12Q8WXF0 261 aaKnown RBP13.85□□□□□ -0.19
SREBF1-213ENST00000485080 TRIM63Q969Q1 353 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 MRGPRFQ96AM1 343 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 SPIN2AQ99865 258 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 SPIN2BQ9BPZ2 258 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 SLA2Q9H6Q3 261 aa13.85□□□□□ -0.19
SREBF1-213ENST00000485080 MSGN1A6NI15 193 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 MPPED1O15442 326 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 S1PR2O95136 353 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 CD40LGP29965 261 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 MYCNOSP40205 109 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 TNXAQ16473 311 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 ETV3LQ6ZN32 361 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 C18orf65Q6ZTR6 163 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 TBC1D26Q86UD7 250 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 Q8N402 240 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 P2RX4Q99571 388 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 PRRT1Q99946 306 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 VSIG4Q9Y279 399 aa13.84□□□□□ -0.19
SREBF1-213ENST00000485080 NUDT19A8MXV4 375 aa13.83□□□□□ -0.2
SREBF1-213ENST00000485080 CTSDP07339 412 aaPredicted RBP13.83□□□□□ -0.2
SREBF1-213ENST00000485080 PGAM2P15259 253 aa13.83□□□□□ -0.2
SREBF1-213ENST00000485080 RPL8P62917 257 aaKnown RBP13.83□□□□□ -0.2
SREBF1-213ENST00000485080 PYDC2Q56P42 97 aa13.83□□□□□ -0.2
SREBF1-213ENST00000485080 C8orf86Q6ZUL3 223 aa13.83□□□□□ -0.2
SREBF1-213ENST00000485080 A6NHS1 94 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 MARCH11A6NNE9 402 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 I3L521 148 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 UPK2O00526 184 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 B3GALNT1O75752 331 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 PF4P02776 101 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 RPA2P15927 270 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 HLA-GP17693 338 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 LPAR6P43657 344 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 PIGPP57054 158 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 AP3S2P59780 193 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 KLF9Q13886 244 aaPredicted RBP13.82□□□□□ -0.2
SREBF1-213ENST00000485080 SCGB2B2Q4G0G5 96 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 SSX9Q7RTT3 188 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 OR13C8Q8NGS7 320 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 TMEM140Q9NV12 185 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 SCP2D1Q9UJQ7 156 aa13.82□□□□□ -0.2
SREBF1-213ENST00000485080 TEX22C9J3V5 150 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 H0Y980 276 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 CCL24O00175 119 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 RPL27AP46776 148 aaKnown RBP13.81□□□□□ -0.2
SREBF1-213ENST00000485080 ERVK-16P61578 105 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 FHL3Q13643 280 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 FAAP20Q6NZ36 180 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 LINC00299Q6ZSB3 139 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 MRPL41Q8IXM3 137 aaKnown RBP13.81□□□□□ -0.2
SREBF1-213ENST00000485080 TTC9CQ8N5M4 171 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 GDPD1Q8N9F7 314 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 CCDC71LQ8N9Z2 235 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 ADAD2Q8NCV1 583 aaKnown RBP13.81□□□□□ -0.2
SREBF1-213ENST00000485080 OR51S1Q8NGJ8 323 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 RAX2Q96IS3 184 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 SRSF8Q9BRL6 282 aaKnown RBP13.81□□□□□ -0.2
SREBF1-213ENST00000485080 SRRQ9GZT4 340 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 GPR132Q9UNW8 380 aa13.81□□□□□ -0.2
SREBF1-213ENST00000485080 OR9G9P0C7N8 305 aa13.8□□□□□ -0.2
SREBF1-213ENST00000485080 PI3P19957 117 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms