RNA–Protein interactions for RNA: ENST00000484328.1

NCL-209, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 369 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-209ENST00000484328 CRIP2P52943 208 aaPredicted RBP5.09□□□□□ -1.59
NCL-209ENST00000484328 RPS16P62249 146 aaKnown RBP5.09□□□□□ -1.59
NCL-209ENST00000484328 NDPQ00604 133 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 PRSS8Q16651 343 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 TRIM16LQ309B1 348 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 ANKRD55Q3KP44 614 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 VMA21Q3ZAQ7 101 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 C4orf46Q504U0 113 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 NMSQ5H8A3 153 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 TMEM268Q5VZI3 342 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 PPP1R27Q86WC6 154 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 FOXRED2Q8IWF2 684 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 SELENOHQ8IZQ5 122 aaKnown RBP5.09□□□□□ -1.59
NCL-209ENST00000484328 VKORC1L1Q8N0U8 176 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 SLC35G3Q8N808 338 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 OR4A5Q8NH83 315 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 VSTM2AQ8TAG5 236 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 ZNF431Q8TF32 576 aaPredicted RBP5.09□□□□□ -1.59
NCL-209ENST00000484328 OR2A7Q96R45 310 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 HSPB9Q9BQS6 159 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 FBXL15Q9H469 300 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 C16orf95Q9H693 158 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 TNFRSF19Q9NS68 423 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 TMEM140Q9NV12 185 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 PRR13Q9NZ81 148 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 KIAA1456Q9P272 454 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 SHPKQ9UHJ6 478 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 KCNIP3Q9Y2W7 256 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 MMP24Q9Y5R2 645 aa5.09□□□□□ -1.59
NCL-209ENST00000484328 IGHV7-81A0A0B4J1V7 117 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 TRAV3A0A0B4J244 114 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 C15orf61A6NNL5 157 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 NCBP2LA6PVI3 153 aaKnown RBP5.08□□□□□ -1.6
NCL-209ENST00000484328 SNRPGP15A8MWD9 76 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 INMT-MINDY4F8WBC2 141 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 UPK2O00526 184 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 KCNAB3O43448 404 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 ATG12O94817 140 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 CA2P00918 260 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 KRASP01116 189 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 IGF1P05019 195 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 HKR1P10072 659 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 VDAC1P21796 283 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 G6PCP35575 357 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 COMPP49747 757 aaPredicted RBP5.08□□□□□ -1.6
NCL-209ENST00000484328 ERVK-16P61578 105 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 BLCAPP62952 87 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 SRSF2Q01130 221 aaKnown RBP5.08□□□□□ -1.6
NCL-209ENST00000484328 KRTAP24-1Q3LI83 254 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 PDLIM3Q53GG5 364 aaPredicted RBP5.08□□□□□ -1.6
NCL-209ENST00000484328 C19orf54Q5BKX5 351 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 LIN54Q6MZP7 749 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 ZNF562Q6V9R5 426 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 Q6ZS46 218 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 Q6ZSV7 163 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 FAM219AQ8IW50 185 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 MMD2Q8IY49 270 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 LGI3Q8N145 548 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 MINDY2Q8NBR6 621 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 OR52B4Q8NGK2 314 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 WIPF2Q8TF74 440 aaPredicted RBP5.08□□□□□ -1.6
NCL-209ENST00000484328 LSM10Q969L4 123 aaKnown RBP5.08□□□□□ -1.6
NCL-209ENST00000484328 RASL11BQ9BPW5 248 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 SEC22CQ9BRL7 303 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 ZNF430Q9H8G1 570 aaPredicted RBP5.08□□□□□ -1.6
NCL-209ENST00000484328 TMEM14BQ9NUH8 114 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 COA4Q9NYJ1 87 aa5.08□□□□□ -1.6
NCL-209ENST00000484328 TET2Q6N021 2002 aaPredicted RBP5.07□□□□□ -1.6
NCL-209ENST00000484328 A0A1B0GW64 132 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 SH2D7A6NKC9 451 aaPredicted RBP5.07□□□□□ -1.6
NCL-209ENST00000484328 CGB1A6NKQ9 187 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 FCN1O00602 326 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 ATP6V0E1O15342 81 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 OR9G9P0C7N8 305 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 EGR2P11161 476 aaPredicted RBP5.07□□□□□ -1.6
NCL-209ENST00000484328 SLC25A6P12236 298 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 HLA-GP17693 338 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 MAS1LP35410 378 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 AKR1C2P52895 323 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 RAB25P57735 213 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 RPL8P62917 257 aaKnown RBP5.07□□□□□ -1.6
NCL-209ENST00000484328 CX3CL1P78423 397 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 CFHR3Q02985 330 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 PJVKQ0ZLH3 352 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 TATDN3Q17R31 274 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 SSX9Q7RTT3 188 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 H2BFWTQ7Z2G1 175 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 LYZL2Q7Z4W2 148 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 ZNF429Q86V71 674 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 ZNF695Q8IW36 515 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.07□□□□□ -1.6
NCL-209ENST00000484328 DMBX1Q8NFW5 382 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 OR4F5Q8NH21 305 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 COQ8AQ8NI60 647 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 CASTOR1Q8WTX7 329 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 ARPC1AQ92747 370 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 PHB2Q99623 299 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 PRSS22Q9GZN4 317 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 WNT10AQ9GZT5 417 aa5.07□□□□□ -1.6
NCL-209ENST00000484328 OR51J1Q9H342 316 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms