RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 SRRM4A7MD48 611 aaKnown RBP7.78□□□□□ -1.16
CPSF4-213ENST00000484112 J3QRK9 145 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 CCL24O00175 119 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 FCN1O00602 326 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 CNIH1O95406 144 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 RPL30P62888 115 aaKnown RBP7.78□□□□□ -1.16
CPSF4-213ENST00000484112 FXYD3Q14802 87 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 POU2AF1Q16633 256 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 PRSS8Q16651 343 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 DEFB136Q30KP8 78 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 CASC10Q5T4H9 136 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 TMEM65Q6PI78 240 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 SPAG16Q8N0X2 631 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 UBE2E2Q96LR5 201 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 SOSTQ9BQB4 213 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 RSRP1Q9BUV0 290 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 GAR1Q9NY12 217 aaKnown RBP7.78□□□□□ -1.16
CPSF4-213ENST00000484112 COMMD9Q9P000 198 aa7.78□□□□□ -1.16
CPSF4-213ENST00000484112 PGLYRP1O75594 196 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-213ENST00000484112 B3GALNT1O75752 331 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 ACTL6BO94805 426 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 KBTBD11O94819 623 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 OR2A4O95047 310 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 LY86O95711 162 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 FCER2P06734 321 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 SAA1P0DJI8 122 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-213ENST00000484112 NQO2P16083 231 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 F2RP25116 425 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 TNFSF8P32971 234 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 BRWD1-AS2P59051 145 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 NDPQ00604 133 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 RUNX1Q01196 453 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 SURF2Q15527 256 aaPredicted RBP7.77□□□□□ -1.17
CPSF4-213ENST00000484112 C9orf66Q5T8R8 295 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 AADACL3Q5VUY0 350 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 STEAP1BQ6NZ63 245 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 LCNL1Q6ZST4 164 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 LHFPL1Q86WI0 220 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 PUSL1Q8N0Z8 303 aaKnown RBP7.77□□□□□ -1.17
CPSF4-213ENST00000484112 MUC7Q8TAX7 377 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 TMEM167AQ8TBQ9 72 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 C4orf3Q8WVX3 66 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 RHOVQ96L33 236 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 OR2A7Q96R45 310 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 SPIN2AQ99865 258 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 SPIN2BQ9BPZ2 258 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 FXYD6Q9H0Q3 95 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 BET1LQ9NYM9 111 aa7.77□□□□□ -1.17
CPSF4-213ENST00000484112 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 A0A1W2PN81 502 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 SEC14L6B5MCN3 397 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 DISC1C4P0D8 188 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 G3V318 75 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 ARPC1BO15143 372 aaKnown RBP7.76□□□□□ -1.17
CPSF4-213ENST00000484112 TNFSF12O43508 249 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 RAB3DO95716 219 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 CD3DP04234 171 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 RPLP1P05386 114 aaKnown RBP7.76□□□□□ -1.17
CPSF4-213ENST00000484112 AKAIN1P0CW23 69 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 EGR2P11161 476 aaPredicted RBP7.76□□□□□ -1.17
CPSF4-213ENST00000484112 CHRNA7P36544 502 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 ETV6P41212 452 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 RAB9AP51151 201 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 RND3P61587 244 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 ECSCRQ19T08 205 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 THOC7Q6I9Y2 204 aaKnown RBP7.76□□□□□ -1.17
CPSF4-213ENST00000484112 UNQ5815/PRO19632Q6UWF5 114 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 LFNGQ8NES3 379 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 TERB2Q8NHR7 220 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 ZFAND1Q8TCF1 268 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 ABHD5Q8WTS1 349 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 RBMXL1Q96E39 390 aaKnown RBP7.76□□□□□ -1.17
CPSF4-213ENST00000484112 CLCC1Q96S66 551 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 PRRT1Q99946 306 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 PALMDQ9NP74 551 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 VSIG4Q9Y279 399 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 WSB1Q9Y6I7 421 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 TENM3Q9P273 2699 aa7.76□□□□□ -1.17
CPSF4-213ENST00000484112 A0A0G2JLM5 398 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 ANKRD20A5PA0PJZ0 165 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 RLN1P04808 185 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 IL6RP08887 468 aaPredicted RBP7.75□□□□□ -1.17
CPSF4-213ENST00000484112 RPA2P15927 270 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 FAUP35544 74 aaKnown RBP7.75□□□□□ -1.17
CPSF4-213ENST00000484112 AP3S2P59780 193 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 ERVK-16P61578 105 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 SSBP2P81877 361 aaPredicted RBP7.75□□□□□ -1.17
CPSF4-213ENST00000484112 MRGPRG-AS1Q2M3A8 158 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 OR2B11Q5JQS5 317 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 FAM209BQ5JX69 171 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 SPANXN2Q5MJ10 180 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 SLC25A42Q86VD7 318 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 ZNF491Q8N8L2 437 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 OR51H1Q8NH63 302 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 SRSF12Q8WXF0 261 aaKnown RBP7.75□□□□□ -1.17
CPSF4-213ENST00000484112 SRSF8Q9BRL6 282 aaKnown RBP7.75□□□□□ -1.17
CPSF4-213ENST00000484112 TINAGL1Q9GZM7 467 aaPredicted RBP7.75□□□□□ -1.17
CPSF4-213ENST00000484112 ZNF430Q9H8G1 570 aaPredicted RBP7.75□□□□□ -1.17
CPSF4-213ENST00000484112 SLC2A9Q9NRM0 540 aa7.75□□□□□ -1.17
CPSF4-213ENST00000484112 TPSG1Q9NRR2 321 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms