RNA–Protein interactions for RNA: ENST00000483961.6

CDC23-207, Transcript of cell division cycle 23, humanhuman

TSL 4

Gene CDC23, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-207ENST00000483961 FKBP11Q9NYL4 201 aa11.79□□□□□ -0.52
CDC23-207ENST00000483961 IGHV7-81A0A0B4J1V7 117 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 DUXBA0A1W2PPF3 345 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 CDS2O95674 445 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 CA2P00918 260 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 KRASP01116 189 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 VAMP1P23763 118 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 AKR1C2P52895 323 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 RPL8P62917 257 aaKnown RBP11.78□□□□□ -0.52
CDC23-207ENST00000483961 CX3CL1P78423 397 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 LGI3Q8N145 548 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 COMMD1Q8N668 190 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 ADAD2Q8NCV1 583 aaKnown RBP11.78□□□□□ -0.52
CDC23-207ENST00000483961 RNASE11Q8TAA1 199 aaKnown RBP11.78□□□□□ -0.52
CDC23-207ENST00000483961 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 TMEM230Q96A57 120 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 NUDT15Q9NV35 164 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 PRNDQ9UKY0 176 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
CDC23-207ENST00000483961 ARPC1BO15143 372 aaKnown RBP11.77□□□□□ -0.53
CDC23-207ENST00000483961 SFT2D2O95562 160 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 MDKP21741 143 aaPredicted RBP11.77□□□□□ -0.53
CDC23-207ENST00000483961 VDAC1P21796 283 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 CRIP2P52943 208 aaPredicted RBP11.77□□□□□ -0.53
CDC23-207ENST00000483961 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.53
CDC23-207ENST00000483961 FXYD3Q14802 87 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 C4orf46Q504U0 113 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 AWAT1Q58HT5 328 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 PLET1Q6UQ28 207 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 C12orf54Q6X4T0 127 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 SSX9Q7RTT3 188 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
CDC23-207ENST00000483961 DUSP18Q8NEJ0 188 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 ABHD5Q8WTS1 349 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 ARPC1AQ92747 370 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 SEC22AQ96IW7 307 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 SPIN2AQ99865 258 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 SPIN2BQ9BPZ2 258 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 SERTAD4Q9NUC0 356 aa11.77□□□□□ -0.53
CDC23-207ENST00000483961 UPK2O00526 184 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 PTTG1O95997 202 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
CDC23-207ENST00000483961 H2AFB2P0C5Z0 115 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 HLA-GP17693 338 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 G6PCP35575 357 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 MECP2P51608 486 aaKnown RBP11.76□□□□□ -0.53
CDC23-207ENST00000483961 PROK1P58294 105 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 IFITM3Q01628 133 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 TMEM187Q14656 261 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 TNXAQ16473 311 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 SP6Q3SY56 376 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 CENPVQ7Z7K6 275 aaPredicted RBP11.76□□□□□ -0.53
CDC23-207ENST00000483961 VKORC1L1Q8N0U8 176 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 STPG2Q8N412 459 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 LRTM2Q8N967 370 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 SGMS2Q8NHU3 365 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 COQ8AQ8NI60 647 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 CLCC1Q96S66 551 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 HSPB9Q9BQS6 159 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 SRSF8Q9BRL6 282 aaKnown RBP11.76□□□□□ -0.53
CDC23-207ENST00000483961 COMMD5Q9GZQ3 224 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 WNT10AQ9GZT5 417 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
CDC23-207ENST00000483961 PARP11Q9NR21 331 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 ATRQ13535 2644 aa11.76□□□□□ -0.53
CDC23-207ENST00000483961 TRAV41A0A0B4J266 112 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 A0A0B4J2A0 478 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 PSMB11A5LHX3 300 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 ATP6V0E1O15342 81 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 IL6RP08887 468 aaPredicted RBP11.75□□□□□ -0.53
CDC23-207ENST00000483961 OR4E1P0C645 316 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 GNB1P62873 340 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 SUPT4H1P63272 117 aaKnown RBP11.75□□□□□ -0.53
CDC23-207ENST00000483961 PPP1R1AQ13522 171 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 AKIRIN2Q53H80 203 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 HSD17B13Q7Z5P4 300 aaPredicted RBP11.75□□□□□ -0.53
CDC23-207ENST00000483961 LYG2Q86SG7 212 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 KLHDC1Q8N7A1 406 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 OR4X2Q8NGF9 303 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 OR5B3Q8NH48 314 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 OR4A16Q8NH70 328 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 LSM10Q969L4 123 aaKnown RBP11.75□□□□□ -0.53
CDC23-207ENST00000483961 TPSG1Q9NRR2 321 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 SHPKQ9UHJ6 478 aa11.75□□□□□ -0.53
CDC23-207ENST00000483961 CUBNO60494 3623 aa11.74□□□□□ -0.53
CDC23-207ENST00000483961 C9orf170A2RU37 121 aa11.74□□□□□ -0.53
CDC23-207ENST00000483961 SH2D7A6NKC9 451 aaPredicted RBP11.74□□□□□ -0.53
CDC23-207ENST00000483961 FCN1O00602 326 aa11.74□□□□□ -0.53
CDC23-207ENST00000483961 PRAF2O60831 178 aa11.74□□□□□ -0.53
CDC23-207ENST00000483961 RBMXL2O75526 392 aaKnown RBP11.74□□□□□ -0.53
CDC23-207ENST00000483961 DUS4LO95620 317 aaKnown RBP11.74□□□□□ -0.53
CDC23-207ENST00000483961 IGKV1-39P01597 117 aa11.74□□□□□ -0.53
CDC23-207ENST00000483961 IGKV1D-39P04432 117 aa11.74□□□□□ -0.53
CDC23-207ENST00000483961 RPL27AP46776 148 aaKnown RBP11.74□□□□□ -0.53
CDC23-207ENST00000483961 Q6ZS46 218 aa11.74□□□□□ -0.53
CDC23-207ENST00000483961 SELENOHQ8IZQ5 122 aaKnown RBP11.74□□□□□ -0.53
CDC23-207ENST00000483961 C3orf56Q8N813 242 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms