RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 OR2T10Q8NGZ9 312 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 OR10C1Q96KK4 312 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 TMEM160Q9NX00 188 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 BET1LQ9NYM9 111 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 PRNDQ9UKY0 176 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 ARHGAP32A7KAX9 2087 aa11.26□□□□□ -0.61
SMAD9-204ENST00000483941 WRBO00258 174 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 TIMM23O14925 209 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 MOSP00540 346 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 IGKV1-16P04430 117 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 NUP62P37198 522 aaPredicted RBP11.25□□□□□ -0.61
SMAD9-204ENST00000483941 LINC00205P59089 165 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 UBE2KP61086 200 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 SCGB2A2Q13296 93 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 TEX45Q8NA69 505 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 PPP1R1CQ8WVI7 109 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 MEGF9Q9H1U4 602 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 TMEM140Q9NV12 185 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 C1RLQ9NZP8 487 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 KIAA1456Q9P272 454 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 CACNG5Q9UF02 275 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 NUP50Q9UKX7 468 aa11.25□□□□□ -0.61
SMAD9-204ENST00000483941 C4BPBP20851 252 aa11.24□□□□□ -0.61
SMAD9-204ENST00000483941 SRSF2Q01130 221 aaKnown RBP11.24□□□□□ -0.61
SMAD9-204ENST00000483941 ZNF429Q86V71 674 aa11.24□□□□□ -0.61
SMAD9-204ENST00000483941 FOXRED2Q8IWF2 684 aa11.24□□□□□ -0.61
SMAD9-204ENST00000483941 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
SMAD9-204ENST00000483941 OR4D5Q8NGN0 318 aa11.24□□□□□ -0.61
SMAD9-204ENST00000483941 OR52E5Q8NH55 327 aa11.24□□□□□ -0.61
SMAD9-204ENST00000483941 CLCC1Q96S66 551 aa11.24□□□□□ -0.61
SMAD9-204ENST00000483941 MPTX1A8MV57 137 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 PITX3O75364 302 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 VENTXO95231 258 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 MPC2O95563 127 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 P0C879 139 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 SLC25A4P12235 298 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 HNF1AP20823 631 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 S100A10P60903 97 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 ID3Q02535 119 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 IL15RAQ13261 267 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 EBI3Q14213 229 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 HES1Q14469 280 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 OR4A47Q6IF82 309 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 NOXA1Q86UR1 476 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 MRPL41Q8IXM3 137 aaKnown RBP11.23□□□□□ -0.61
SMAD9-204ENST00000483941 CFHR4Q92496 578 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 CIB3Q96Q77 187 aaPredicted RBP11.23□□□□□ -0.61
SMAD9-204ENST00000483941 POMT1Q9Y6A1 747 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 TENM1Q9UKZ4 2725 aa11.23□□□□□ -0.61
SMAD9-204ENST00000483941 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 HMSDA8MTL9 139 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 E5RGE8 158 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 L7N2F9 121 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 UPK2O00526 184 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 GPR137BO60478 399 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 ACTL6BO94805 426 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 KBTBD11O94819 623 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 SCGB1D2O95969 90 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 IGKV1D-33P01593 117 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 IGKV1-33P01594 117 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 IGHV4-38-2P0DP08 117 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 MAS1LP35410 378 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 VAMP2P63027 116 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 LDLRAD2Q5SZI1 272 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 PRSS54Q6PEW0 395 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 TMEM65Q6PI78 240 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 C9orf139Q6ZV77 190 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 PUSL1Q8N0Z8 303 aaKnown RBP11.22□□□□□ -0.61
SMAD9-204ENST00000483941 INO80EQ8NBZ0 244 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-204ENST00000483941 OR5B3Q8NH48 314 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 TMEM167AQ8TBQ9 72 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 RAB40CQ96S21 281 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 PITPNC1Q9UKF7 332 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 FOXA2Q9Y261 457 aaPredicted RBP11.22□□□□□ -0.61
SMAD9-204ENST00000483941 ZNF257Q9Y2Q1 563 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 NSG2Q9Y328 171 aa11.22□□□□□ -0.61
SMAD9-204ENST00000483941 SCAF4O95104 1147 aaKnown RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 IFNA17P01571 189 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 SNRNP70P08621 437 aaKnown RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 SAA1P0DJI8 122 aaPredicted RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 TMEM11P17152 192 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 SRD5A1P18405 259 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 EIF2B2P49770 351 aaKnown RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 SPCS3P61009 180 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 RPL8P62917 257 aaKnown RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 RPP30P78346 268 aaKnown RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 RAB32Q13637 225 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 PLGLAQ15195 96 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 LRRC75BQ2VPJ9 315 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 LRRC37A5PQ49AS3 106 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 NPBQ8NG41 125 aa11.21□□□□□ -0.61
SMAD9-204ENST00000483941 EAF1Q96JC9 268 aaPredicted RBP11.21□□□□□ -0.61
SMAD9-204ENST00000483941 COMMD5Q9GZQ3 224 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms