RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TCF19Q9Y242 345 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 ZNF257Q9Y2Q1 563 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 POLR3KQ9Y2Y1 108 aaPredicted RBP11.37□□□□□ -0.59
CLK3-204ENST00000483723 STRAPQ9Y3F4 350 aaKnown RBP11.37□□□□□ -0.59
CLK3-204ENST00000483723 KPTNQ9Y664 436 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 ARHGAP32A7KAX9 2087 aa11.37□□□□□ -0.59
CLK3-204ENST00000483723 ANKRD34BA5PLL1 514 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 MFSD2BA6NFX1 497 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 VWC2LB2RUY7 222 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 H7C2Y5 167 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 ENSAO43768 121 aaKnown RBP11.36□□□□□ -0.59
CLK3-204ENST00000483723 KBTBD11O94819 623 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 IFNA17P01571 189 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 RAB13P51153 203 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 HBG1P69891 147 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 HBG2P69892 147 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 ATP6V1FQ16864 119 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 EIF4E3Q8N5X7 224 aaKnown RBP11.36□□□□□ -0.59
CLK3-204ENST00000483723 CITED4Q96RK1 184 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 PARD6GQ9BYG4 376 aaPredicted RBP11.36□□□□□ -0.59
CLK3-204ENST00000483723 PFDN2Q9UHV9 154 aa11.36□□□□□ -0.59
CLK3-204ENST00000483723 C15orf62A8K5M9 175 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 NDUFS8O00217 210 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 IGLV2-23P01705 113 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 SAA1P0DJI8 122 aaPredicted RBP11.35□□□□□ -0.59
CLK3-204ENST00000483723 COX6B1P14854 86 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 COX7A1P24310 79 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 ATP6V0CP27449 155 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 OR4A5Q8NH83 315 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 C10orf105Q8TEF2 133 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 HARBI1Q96MB7 349 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 TSNAXQ99598 290 aaKnown RBP11.35□□□□□ -0.59
CLK3-204ENST00000483723 SIRPDQ9H106 197 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 IGHV1-3A0A0C4DH29 117 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 IGHV2-70DA0A0C4DH43 119 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 SCAF4O95104 1147 aaKnown RBP11.35□□□□□ -0.59
CLK3-204ENST00000483723 FGF2P09038 288 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 OR8U8P0C7N1 319 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 LGALS7P47929 136 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 PRB3Q04118 309 aaPredicted RBP11.35□□□□□ -0.59
CLK3-204ENST00000483723 AANATQ16613 207 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 LDLRAD2Q5SZI1 272 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 HSD17B13Q7Z5P4 300 aaPredicted RBP11.35□□□□□ -0.59
CLK3-204ENST00000483723 HSD17B11Q8NBQ5 300 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 TMEM167AQ8TBQ9 72 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 GNPNAT1Q96EK6 184 aaPredicted RBP11.35□□□□□ -0.59
CLK3-204ENST00000483723 MS4A7Q9GZW8 240 aaPredicted RBP11.35□□□□□ -0.59
CLK3-204ENST00000483723 FKBP11Q9NYL4 201 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 NUP50Q9UKX7 468 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 INSIG2Q9Y5U4 225 aa11.35□□□□□ -0.59
CLK3-204ENST00000483723 TENM4Q6N022 2769 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 RAB5CP51148 216 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 RPS16P62249 146 aaKnown RBP11.34□□□□□ -0.59
CLK3-204ENST00000483723 BLOC1S1P78537 153 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 LRRC75BQ2VPJ9 315 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 SPINK9Q5DT21 86 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 VSTM2AQ8TAG5 236 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 FAM210AQ96ND0 272 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 HIPK2Q9H2X6 1198 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 SIRT7Q9NRC8 400 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 DPM3Q9P2X0 92 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 OR51B2Q9Y5P1 312 aa11.34□□□□□ -0.59
CLK3-204ENST00000483723 TEX50A0A1B0GTY4 177 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 ZNF705EA8MWA4 302 aaPredicted RBP11.33□□□□□ -0.6
CLK3-204ENST00000483723 FOXH1O75593 365 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 IFNA5P01569 189 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 USF1P22415 310 aaPredicted RBP11.33□□□□□ -0.6
CLK3-204ENST00000483723 HTR1DP28221 377 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 RPP30P78346 268 aaKnown RBP11.33□□□□□ -0.6
CLK3-204ENST00000483723 SLC38A11Q08AI6 406 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 VWC2Q2TAL6 325 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 TPTE2P1Q5T6R2 138 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 OR5B3Q8NH48 314 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 LYPD6BQ8NI32 183 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 FAM168AQ92567 244 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 RNF5Q99942 180 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 PARP11Q9NR21 331 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 MMP26Q9NRE1 261 aa11.33□□□□□ -0.6
CLK3-204ENST00000483723 A0A1W2PPI3 338 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 INS-IGF2F8WCM5 200 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 CRYGBP07316 175 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 ATP5J2P56134 94 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 LCN2P80188 198 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 PRCDQ00LT1 54 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 HABP2Q14520 560 aaPredicted RBP11.32□□□□□ -0.6
CLK3-204ENST00000483723 MRGPRG-AS1Q2M3A8 158 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 BTNL8Q6UX41 500 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 VMO1Q7Z5L0 202 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 TEX45Q8NA69 505 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 OR10P1Q8NGE3 313 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 RPEQ96AT9 228 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 PINX1Q96BK5 328 aaKnown RBP11.32□□□□□ -0.6
CLK3-204ENST00000483723 RITA1Q96K30 269 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 CLCC1Q96S66 551 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 PIMREGQ9BSJ6 248 aa11.32□□□□□ -0.6
CLK3-204ENST00000483723 HEYLQ9NQ87 328 aaPredicted RBP11.32□□□□□ -0.6
CLK3-204ENST00000483723 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms