RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SOSTQ9BQB4 213 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 RSRP1Q9BUV0 290 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 C6orf62Q9GZU0 229 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-225ENST00000483506 PLEKHA2Q9HB19 425 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 BET1LQ9NYM9 111 aa13.98□□□□□ -0.17
HDAC6-225ENST00000483506 PRKDCP78527 4128 aaKnown RBP13.98□□□□□ -0.17
HDAC6-225ENST00000483506 M0QYG6 137 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 CD3DP04234 171 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 FGF2P09038 288 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 CD40LGP29965 261 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 MAS1LP35410 378 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 RNASE10Q5GAN6 216 aaKnown RBP13.97□□□□□ -0.17
HDAC6-225ENST00000483506 POC5Q8NA72 575 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 OR4A5Q8NH83 315 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 MCFD2Q8NI22 146 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 TINAGL1Q9GZM7 467 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-225ENST00000483506 FAM212BQ9NTI7 297 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-225ENST00000483506 COMMD9Q9P000 198 aa13.97□□□□□ -0.17
HDAC6-225ENST00000483506 RSL24D1Q9UHA3 163 aaKnown RBP13.97□□□□□ -0.17
HDAC6-225ENST00000483506 MSGN1A6NI15 193 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 RLN1P04808 185 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 IL6RP08887 468 aaPredicted RBP13.96□□□□□ -0.17
HDAC6-225ENST00000483506 IGLL1P15814 213 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 NQO2P16083 231 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 F2RP25116 425 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 TAS2R19P59542 299 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 SLC38A6Q8IZM9 456 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 CADM3Q8N126 398 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 CASTOR1Q8WTX7 329 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 DUX3Q96PT4 197 aa13.96□□□□□ -0.17
HDAC6-225ENST00000483506 GSTZ1O43708 216 aaPredicted RBP13.95□□□□□ -0.18
HDAC6-225ENST00000483506 ACTL6BO94805 426 aa13.95□□□□□ -0.18
HDAC6-225ENST00000483506 LGALS1P09382 135 aaKnown RBP13.95□□□□□ -0.18
HDAC6-225ENST00000483506 TNFSF8P32971 234 aa13.95□□□□□ -0.18
HDAC6-225ENST00000483506 IL18Q14116 193 aa13.95□□□□□ -0.18
HDAC6-225ENST00000483506 OR4A47Q6IF82 309 aa13.95□□□□□ -0.18
HDAC6-225ENST00000483506 OR11H1Q8NG94 326 aa13.95□□□□□ -0.18
HDAC6-225ENST00000483506 DGCR14Q96DF8 476 aaKnown RBP13.95□□□□□ -0.18
HDAC6-225ENST00000483506 SPIN2AQ99865 258 aa13.95□□□□□ -0.18
HDAC6-225ENST00000483506 SPIN2BQ9BPZ2 258 aa13.95□□□□□ -0.18
HDAC6-225ENST00000483506 MCRIP2Q9BUT9 160 aaKnown RBP13.95□□□□□ -0.18
HDAC6-225ENST00000483506 CCDC160A6NGH7 325 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 WIPF1O43516 503 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 S1PR2O95136 353 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 IFNA6P05013 189 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 OR8U8P0C7N1 319 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 TPPP2P59282 170 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 RPL8P62917 257 aaKnown RBP13.94□□□□□ -0.18
HDAC6-225ENST00000483506 ZNF585BQ52M93 769 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 C10orf55Q5SWW7 151 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 STEAP1BQ6NZ63 245 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 ADAD2Q8NCV1 583 aaKnown RBP13.94□□□□□ -0.18
HDAC6-225ENST00000483506 OR5T1Q8NG75 326 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 OR4D10Q8NGI6 311 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 ZNF486Q96H40 463 aaPredicted RBP13.94□□□□□ -0.18
HDAC6-225ENST00000483506 PHB2Q99623 299 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 GPR61Q9BZJ8 451 aa13.94□□□□□ -0.18
HDAC6-225ENST00000483506 TEX22C9J3V5 150 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 RAB3DO95716 219 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 TRGV3P03979 118 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 OR9G9P0C7N8 305 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 ZNF735P0CB33 412 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 S100GP29377 79 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 RND3P61587 244 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 ZNF616Q08AN1 781 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 PHLDA2Q53GA4 152 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 SSX9Q7RTT3 188 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 TTC9CQ8N5M4 171 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 OR1N2Q8NGR9 330 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 MS4A10Q96PG2 267 aa13.93□□□□□ -0.18
HDAC6-225ENST00000483506 A0A1B0GW64 132 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 UPK2O00526 184 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 HLA-GP17693 338 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 PTBP1P26599 531 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDAC6-225ENST00000483506 RPL27AP46776 148 aaKnown RBP13.92□□□□□ -0.18
HDAC6-225ENST00000483506 MEF2DQ14814 521 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 PDLIM3Q53GG5 364 aaPredicted RBP13.92□□□□□ -0.18
HDAC6-225ENST00000483506 TBC1D26Q86UD7 250 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 TERB2Q8NHR7 220 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 OR5B12Q96R08 314 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 SLC2A9Q9NRM0 540 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 TMEM140Q9NV12 185 aa13.92□□□□□ -0.18
HDAC6-225ENST00000483506 A0A0G2JLM5 398 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 FABP12A6NFH5 140 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 MARCH11A6NNE9 402 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 E7EUB6 86 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 APELAP0DMC3 54 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 LPAR6P43657 344 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 EGFEM1PQ0D2K5 195 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 KLK9Q2XQG4 91 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 FOXB2Q5VYV0 432 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 REC114Q7Z4M0 266 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 USMG5Q96IX5 58 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 ALX4Q9H161 411 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-225ENST00000483506 HRASLSQ9HDD0 168 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 ZNF355PQ9NSJ1 428 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 COA4Q9NYJ1 87 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 KLK9Q9UKQ9 250 aa13.91□□□□□ -0.18
HDAC6-225ENST00000483506 TRBV9A0A0B4J1U6 114 aa13.9□□□□□ -0.18
HDAC6-225ENST00000483506 NPIPB5A8MRT5 1133 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms