RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 HES4Q9HCC6 221 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 OR2T8A6NH00 312 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 LAMTOR5O43504 91 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 RBMXL2O75526 392 aaKnown RBP9.85□□□□□ -0.83
VTI1A-205ENST00000483122 CXorf1O96002 111 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 MT-ND6P03923 174 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 CELA2AP08217 269 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 GLB1P16278 677 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 PMCHL1Q16048 86 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 SPATA31B1PQ5VZV4 182 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 OR4A47Q6IF82 309 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 EBLN2Q6P2I7 272 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 WDR73Q6P4I2 378 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 SPATA12Q7Z6I5 190 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 OR4P4Q8NGL7 312 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 ZNF596Q8TC21 504 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 DEFB126Q9BYW3 111 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 MRPL27Q9P0M9 148 aaKnown RBP9.85□□□□□ -0.83
VTI1A-205ENST00000483122 SDK2Q58EX2 2172 aa9.85□□□□□ -0.83
VTI1A-205ENST00000483122 IGLV3-12A0A075B6K2 115 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 C17orf98A8MV24 154 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 K7ESF4 209 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 IGLV3-19P01714 112 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 OTX2P32243 289 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 BRWD1-AS2P59051 145 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 RHOBP62745 196 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 MPV17L2Q567V2 206 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 LRRC10Q5BKY1 277 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 AAED1Q7RTV5 226 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 DOLPP1Q86YN1 238 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 CORO2AQ92828 525 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 PRDM14Q9GZV8 571 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 NCOR1P1Q9H4R4 102 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 SEPSECSQ9HD40 501 aaKnown RBP9.84□□□□□ -0.83
VTI1A-205ENST00000483122 TRAPPC2LQ9UL33 140 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 USF3Q68DE3 2245 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 RNF212BA8MTL3 300 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 C9JCJ5 164 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 H0YJW9 148 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 IGHV3-9P01782 118 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 CA6P23280 308 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 DUSP3P51452 185 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-205ENST00000483122 TNXAQ16473 311 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 PLXDC1Q8IUK5 500 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 C1orf210Q8IVY1 113 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 BCL2L2Q92843 193 aaPredicted RBP9.84□□□□□ -0.83
VTI1A-205ENST00000483122 NUDT11Q96G61 164 aa9.84□□□□□ -0.83
VTI1A-205ENST00000483122 TRGV10A0A0A0MS01 117 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 PRR33A8MZF0 331 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 FOXH1O75593 365 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 RHBDL1O75783 438 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 CCL3P10147 92 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 GCHFRP30047 84 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 GABRA2P47869 451 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 LINC00205P59089 165 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 PCBD1P61457 104 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 SPATA46Q5T0L3 261 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 AMMECR1LQ6DCA0 310 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 COLCA1Q6ZS62 124 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 MRPL21Q7Z2W9 205 aaKnown RBP9.83□□□□□ -0.84
VTI1A-205ENST00000483122 KIR3DL3Q8N743 410 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 SLC24A4Q8NFF2 622 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 C18orf32Q8TCD1 76 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 MGST2Q99735 147 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 ADAMTS20P59510 1910 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 AMY1AP04745 511 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 LIFP15018 202 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 CENPWQ5EE01 88 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 Q6P435 159 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 TREML4Q6UXN2 200 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 C11orf52Q96A22 123 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 PROK2Q9HC23 129 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 GP6Q9HCN6 339 aa9.83□□□□□ -0.84
VTI1A-205ENST00000483122 TNRC6AQ8NDV7 1962 aaKnown RBP9.82□□□□□ -0.84
VTI1A-205ENST00000483122 TNRC6BQ9UPQ9 1833 aaKnown RBP9.82□□□□□ -0.84
VTI1A-205ENST00000483122 FAM181BA6NEQ2 426 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 ZNF716A6NP11 495 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 NEURL1O76050 574 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 CELA3BP08861 270 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 OPRK1P41145 380 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 RPS20P60866 119 aaKnown RBP9.82□□□□□ -0.84
VTI1A-205ENST00000483122 SLAQ13239 276 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 LINC00596Q86U02 117 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 LY96Q9Y6Y9 160 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 DUX1O43812 170 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 APCSP02743 223 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 DSCR4P56555 118 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-205ENST00000483122 CLDN18P56856 261 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 RIPPLY3P57055 190 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 SELENOVP59797 346 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 ARF1P84077 181 aaKnown RBP9.82□□□□□ -0.84
VTI1A-205ENST00000483122 PDLIM3Q53GG5 364 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-205ENST00000483122 ASPHD1Q5U4P2 390 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 C9orf135Q5VTT2 229 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 PQLC2Q6ZP29 291 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 H2BFWTQ7Z2G1 175 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 OR8B3Q8NGG8 313 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 SSMEM1Q8WWF3 244 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 OR8B2Q96RD0 313 aa9.82□□□□□ -0.84
VTI1A-205ENST00000483122 SF3B5Q9BWJ5 86 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms