RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 BET1LQ9NYM9 111 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 V9GYH0 126 aa12.97□□□□□ -0.33
HMGN1-214ENST00000482733 VWFP04275 2813 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 PF4P02776 101 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 ETV6P41212 452 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 RAB9AP51151 201 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 RND3P61587 244 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 SCGB2B2Q4G0G5 96 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 OR6Q1Q8NGQ2 317 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 MYOZ3Q8TDC0 251 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 UBE2E2Q96LR5 201 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 PHB2Q99623 299 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 PRRT1Q99946 306 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 SLC2A9Q9NRM0 540 aa12.96□□□□□ -0.33
HMGN1-214ENST00000482733 H3BUA1 57 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 S1PR2O95136 353 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 ZNF735P0CB33 412 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 AP3S2P59780 193 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 ERVK-16P61578 105 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 SURF2Q15527 256 aaPredicted RBP12.95□□□□□ -0.34
HMGN1-214ENST00000482733 FOXB2Q5VYV0 432 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 OR4A47Q6IF82 309 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 LCNL1Q6ZST4 164 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 SSX9Q7RTT3 188 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 TBC1D26Q86UD7 250 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 Q8N402 240 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 OR4C16Q8NGL9 310 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 SRSF12Q8WXF0 261 aaKnown RBP12.95□□□□□ -0.34
HMGN1-214ENST00000482733 SPIN2AQ99865 258 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 SPIN2BQ9BPZ2 258 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 KLK15Q9H2R5 256 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 SLA2Q9H6Q3 261 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 VSIG4Q9Y279 399 aa12.95□□□□□ -0.34
HMGN1-214ENST00000482733 MSGN1A6NI15 193 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 MPPED1O15442 326 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 SOX15O60248 233 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 FGF2P09038 288 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 FAUP35544 74 aaKnown RBP12.94□□□□□ -0.34
HMGN1-214ENST00000482733 MYCNOSP40205 109 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 LPAR6P43657 344 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 PPP5CP53041 499 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 RPL8P62917 257 aaKnown RBP12.94□□□□□ -0.34
HMGN1-214ENST00000482733 C8orf86Q6ZUL3 223 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 CADM3Q8N126 398 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 ZNF491Q8N8L2 437 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 DMBX1Q8NFW5 382 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 C4orf3Q8WVX3 66 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 DEDD2Q8WXF8 326 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 HRASLSQ9HDD0 168 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 SLC2A8Q9NY64 477 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 SCP2D1Q9UJQ7 156 aa12.94□□□□□ -0.34
HMGN1-214ENST00000482733 BRI3O95415 125 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 CTSDP07339 412 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-214ENST00000482733 PIGPP57054 158 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 KIAA0141Q14154 515 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-214ENST00000482733 ZNF79Q15937 498 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 ZNF585BQ52M93 769 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 FAAP20Q6NZ36 180 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 C18orf65Q6ZTR6 163 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 TMEM140Q9NV12 185 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 COPZ2Q9P299 210 aa12.93□□□□□ -0.34
HMGN1-214ENST00000482733 MARCH11A6NNE9 402 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 UPK2O00526 184 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 B3GALNT1O75752 331 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 SERPINE2P07093 398 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 IL6RP08887 468 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-214ENST00000482733 RPA2P15927 270 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 HLA-GP17693 338 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 RPL27AP46776 148 aaKnown RBP12.92□□□□□ -0.34
HMGN1-214ENST00000482733 ASPHD1Q5U4P2 390 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 TOMM5Q8N4H5 51 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 WFDC9Q8NEX5 89 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 OR5T1Q8NG75 326 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 OR13C8Q8NGS7 320 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 MARCH1Q8TCQ1 289 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 TRIM63Q969Q1 353 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 SCGB3A2Q96PL1 93 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 ZNF355PQ9NSJ1 428 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
HMGN1-214ENST00000482733 NBEAL1Q6ZS30 2694 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 WNK1Q9H4A3 2382 aa12.92□□□□□ -0.34
HMGN1-214ENST00000482733 H0Y980 276 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 CCL24O00175 119 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 PI3P19957 117 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 CD33P20138 364 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 RUNX1Q01196 453 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 KLF9Q13886 244 aaPredicted RBP12.91□□□□□ -0.34
HMGN1-214ENST00000482733 SLC25A42Q86VD7 318 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 GDPD1Q8N9F7 314 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 OR51S1Q8NGJ8 323 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 MRGPRFQ96AM1 343 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 SRRQ9GZT4 340 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 MCUBQ9NWR8 336 aa12.91□□□□□ -0.34
HMGN1-214ENST00000482733 A0A0G2JLM5 398 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 KRASP01116 189 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 TRGV3P03979 118 aa12.9□□□□□ -0.34
HMGN1-214ENST00000482733 TPPP2P59282 170 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms