RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 PRAF2O60831 178 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 KBTBD11O94819 623 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 DUS4LO95620 317 aaKnown RBP12.16□□□□□ -0.46
CCM2-215ENST00000482714 DHFRP00374 187 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 KRASP01116 189 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 SAA1P0DJI8 122 aaPredicted RBP12.16□□□□□ -0.46
CCM2-215ENST00000482714 VDAC1P21796 283 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 VAMP1P23763 118 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 PPP1R1AQ13522 171 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 PRSS8Q16651 343 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 RGS21Q2M5E4 152 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 C4orf46Q504U0 113 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 Q6ZSV7 163 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 LYG2Q86SG7 212 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 SELENOHQ8IZQ5 122 aaKnown RBP12.16□□□□□ -0.46
CCM2-215ENST00000482714 OR2T6Q8NHC8 308 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 LSM10Q969L4 123 aaKnown RBP12.16□□□□□ -0.46
CCM2-215ENST00000482714 RRNAD1Q96FB5 475 aaKnown RBP12.16□□□□□ -0.46
CCM2-215ENST00000482714 SHPKQ9UHJ6 478 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 MMP24Q9Y5R2 645 aa12.16□□□□□ -0.46
CCM2-215ENST00000482714 INMT-MINDY4F8WBC2 141 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 UPK2O00526 184 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 SNAPC5O75971 98 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 ACTL6BO94805 426 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 IGKV1-39P01597 117 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 IGKV1D-39P04432 117 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
CCM2-215ENST00000482714 DHRS2Q13268 280 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 H2BFWTQ7Z2G1 175 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 FOXRED2Q8IWF2 684 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 COQ8AQ8NI60 647 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 TMEM68Q96MH6 324 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 GON7Q9BXV9 100 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 ZNF702PQ9H963 129 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 BEX1Q9HBH7 125 aa12.15□□□□□ -0.46
CCM2-215ENST00000482714 TMEM89A2RUT3 159 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
CCM2-215ENST00000482714 IGF1P05019 195 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 G6PCP35575 357 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 RPL8P62917 257 aaKnown RBP12.14□□□□□ -0.47
CCM2-215ENST00000482714 CX3CL1P78423 397 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 RELBQ01201 579 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
CCM2-215ENST00000482714 TMEM268Q5VZI3 342 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 SLC35E3Q7Z769 313 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 VKORC1L1Q8N0U8 176 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 MITD1Q8WV92 249 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 OR51J1Q9H342 316 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 GPN1Q9HCN4 374 aaPredicted RBP12.14□□□□□ -0.47
CCM2-215ENST00000482714 TMEM140Q9NV12 185 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 IGHV7-81A0A0B4J1V7 117 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 CLPSL1A2RUU4 121 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 AP4M1O00189 453 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 FCN1O00602 326 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 MINDY2Q8NBR6 621 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 RBMXL1Q96E39 390 aaKnown RBP12.14□□□□□ -0.47
CCM2-215ENST00000482714 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
CCM2-215ENST00000482714 TNCP24821 2201 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 CNIH1O95406 144 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 P0C879 139 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 AKR1C2P52895 323 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 CRIP2P52943 208 aaPredicted RBP12.13□□□□□ -0.47
CCM2-215ENST00000482714 FXYD3Q14802 87 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 MRGPRG-AS1Q2M3A8 158 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 C9orf152Q5JTZ5 239 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 LINC01006Q8NI28 216 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 ZNF431Q8TF32 576 aaPredicted RBP12.13□□□□□ -0.47
CCM2-215ENST00000482714 CHPT1Q8WUD6 406 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 PHB2Q99623 299 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 ZNF430Q9H8G1 570 aaPredicted RBP12.13□□□□□ -0.47
CCM2-215ENST00000482714 STAB1Q9NY15 2570 aa12.13□□□□□ -0.47
CCM2-215ENST00000482714 CA2P00918 260 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 IGKV1-5P01602 117 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 SLC25A6P12236 298 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 HLA-GP17693 338 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
CCM2-215ENST00000482714 AKIRIN2Q53H80 203 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 ARSJQ5FYB0 599 aaPredicted RBP12.12□□□□□ -0.47
CCM2-215ENST00000482714 THOC7Q6I9Y2 204 aaKnown RBP12.12□□□□□ -0.47
CCM2-215ENST00000482714 ZNF429Q86V71 674 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.12□□□□□ -0.47
CCM2-215ENST00000482714 OR5B3Q8NH48 314 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 OR4A16Q8NH70 328 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 LHFPL5Q8TAF8 219 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 SRSF8Q9BRL6 282 aaKnown RBP12.12□□□□□ -0.47
CCM2-215ENST00000482714 COMMD5Q9GZQ3 224 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 SERTAD4Q9NUC0 356 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 COA4Q9NYJ1 87 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 ZNF257Q9Y2Q1 563 aa12.12□□□□□ -0.47
CCM2-215ENST00000482714 VDAC2P45880 294 aaPredicted RBP12.11□□□□□ -0.47
CCM2-215ENST00000482714 PJVKQ0ZLH3 352 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 OXA1LQ15070 435 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 ANKRD55Q3KP44 614 aa12.11□□□□□ -0.47
CCM2-215ENST00000482714 KRTAP24-1Q3LI83 254 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms