RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 BEST4Q8NFU0 473 aa10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 OR2K2Q8NGT1 345 aa10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 TMEM167AQ8TBQ9 72 aa10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 FYTTD1Q96QD9 318 aaKnown RBP10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 CITED4Q96RK1 184 aa10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 TUBA4BQ9H853 241 aa10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 PALMDQ9NP74 551 aa10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 TAS2R8Q9NYW2 309 aa10.23□□□□□ -0.77
CTDSP1-208ENST00000482272 LOC100506127A0A0U1RQW1 187 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 HMX3A6NHT5 357 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 BMPR1BO00238 502 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 TMEM127O75204 238 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 OR2J3O76001 311 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 DHFRP00374 187 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 LYL1P12980 280 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 RPL27AP46776 148 aaKnown RBP10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 MSMO1Q15800 293 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 C15orf32Q32M92 178 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 HOGA1Q86XE5 327 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 PUSL1Q8N0Z8 303 aaKnown RBP10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 SECTM1Q8WVN6 248 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 SPATA25Q9BR10 227 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 CCL28Q9NRJ3 127 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 SLC2A9Q9NRM0 540 aa10.22□□□□□ -0.77
CTDSP1-208ENST00000482272 A0A1B0GW64 132 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 NPIPB5A8MRT5 1133 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 E7EUB6 86 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 GGCTO75223 188 aaKnown RBP10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 ZNF735P0CB33 412 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 MECP2P51608 486 aaKnown RBP10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 GVQW1Q8N7I0 195 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 OR13F1Q8NGS4 319 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 OR4A5Q8NH83 315 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 FBXL7Q9UJT9 491 aa10.21□□□□□ -0.77
CTDSP1-208ENST00000482272 TNCP24821 2201 aa10.21□□□□□ -0.78
CTDSP1-208ENST00000482272 TEX22C9J3V5 150 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 TNFSF12O43508 249 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 PPYP01298 95 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 IFNA6P05013 189 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 CRYGCP07315 174 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 IL6RP08887 468 aaPredicted RBP10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 HIST1H1BP16401 226 aaKnown RBP10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 CBX5P45973 191 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 RPL8P62917 257 aaKnown RBP10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 CATR1Q13166 79 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 NEDD8Q15843 81 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 HAGHQ16775 308 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 SSX9Q7RTT3 188 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 CROCCP3Q8IVE0 287 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 SPAG16Q8N0X2 631 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 DYNLRB2Q8TF09 96 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 THAP7Q9BT49 309 aaPredicted RBP10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 HRASLSQ9HDD0 168 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 BET1LQ9NYM9 111 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 STAB2Q8WWQ8 2551 aa10.2□□□□□ -0.78
CTDSP1-208ENST00000482272 IZUMO1RA6ND01 250 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 PPP5D1E7EU14 171 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 LGALS9O00182 355 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 OR2C1O95371 312 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 HPRT1P00492 218 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 FCER2P06734 321 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 DEFA4P12838 97 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 MYOD1P15172 320 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 EDN2P20800 178 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 PSMB6P28072 239 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 CD300EQ496F6 205 aaPredicted RBP10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 GPHB5Q86YW7 130 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 LAX1Q8IWV1 398 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 OR5AP2Q8NGF4 316 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 GIMAP1Q8WWP7 306 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 BORCS5Q969J3 196 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 ISOC1Q96CN7 298 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 S100A16Q96FQ6 103 aaKnown RBP10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 SLC5A7Q9GZV3 580 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 AUNIPQ9H7T9 357 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 SLC2A8Q9NY64 477 aa10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 TECRQ9NZ01 308 aaKnown RBP10.19□□□□□ -0.78
CTDSP1-208ENST00000482272 RBFOX2O43251 390 aaKnown RBP eCLIP10.18□□□□□ -0.785e-6■■■□□ 19.2
CTDSP1-208ENST00000482272 TPPPO94811 219 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 NDUFB8O95169 186 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 HLA-GP17693 338 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 ARL3P36405 182 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 TAS2R31P59538 309 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 FXYD4P59646 89 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 CD81P60033 236 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 DEFB114Q30KQ6 69 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 TIMM50Q3ZCQ8 353 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 FAM106AQ4KMX7 169 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 ADAMTSL5Q6ZMM2 481 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 CD300LFQ8TDQ1 290 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 EEF1AKMT3Q96AZ1 226 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 FANCD2OSQ96PS1 177 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 NEURL2Q9BR09 285 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 DMRT1Q9Y5R6 373 aa10.18□□□□□ -0.78
CTDSP1-208ENST00000482272 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
CTDSP1-208ENST00000482272 CSMD3Q7Z407 3707 aa10.17□□□□□ -0.78
CTDSP1-208ENST00000482272 C2orf70A6NJV1 201 aa10.17□□□□□ -0.78
CTDSP1-208ENST00000482272 CGB1A6NKQ9 187 aa10.17□□□□□ -0.78
CTDSP1-208ENST00000482272 ZNF785A8K8V0 405 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms