RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 GGACTQ9BVM4 153 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 EIF5A2Q9GZV4 153 aaKnown RBP12.9□□□□□ -0.34
RXRA-202ENST00000481739 FBXO7Q9Y3I1 522 aa12.9□□□□□ -0.34
RXRA-202ENST00000481739 DCHS2Q6V1P9 2916 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 A0A1W2PPE3 182 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 MBP02144 154 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 COX6B1P14854 86 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 COL8A2P25067 703 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 C1orf229Q6ZS94 237 aaPredicted RBP12.89□□□□□ -0.35
RXRA-202ENST00000481739 SSX9Q7RTT3 188 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 OSR1Q8TAX0 266 aaPredicted RBP12.89□□□□□ -0.35
RXRA-202ENST00000481739 TNFRSF14Q92956 283 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 TMEM186Q96B77 213 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 MS4A7Q9GZW8 240 aaPredicted RBP12.89□□□□□ -0.35
RXRA-202ENST00000481739 SLC35D1Q9NTN3 355 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 TMEM14BQ9NUH8 114 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 PRNDQ9UKY0 176 aa12.89□□□□□ -0.35
RXRA-202ENST00000481739 RBP4P02753 201 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 CT45A6P0DMU7 189 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 CT45A5P0DMU8 189 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 CT45A7P0DMV0 189 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 PLA2G2AP14555 144 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 CDKN1AP38936 164 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 ZNF137PP52743 207 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 OR2B8PP59922 312 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 UTF1Q5T230 341 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 SP5Q6BEB4 398 aaPredicted RBP12.88□□□□□ -0.35
RXRA-202ENST00000481739 OR4A47Q6IF82 309 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 SCRT1Q9BWW7 348 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 UNKLQ9H9P5 680 aaKnown RBP12.88□□□□□ -0.35
RXRA-202ENST00000481739 ZNF257Q9Y2Q1 563 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 UBE2L5PA0A1B0GUS4 154 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 J3QKU1 62 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 FCN3O75636 299 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 LY6HO94772 140 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 CCL3L1P16619 93 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 VDAC2P45880 294 aaPredicted RBP12.88□□□□□ -0.35
RXRA-202ENST00000481739 DLX6P56179 175 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 ATP5IP56385 69 aaPredicted RBP12.88□□□□□ -0.35
RXRA-202ENST00000481739 TMEM41BQ5BJD5 291 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 SPSB3Q6PJ21 355 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 NEU4Q8WWR8 484 aaPredicted RBP12.88□□□□□ -0.35
RXRA-202ENST00000481739 RSG1Q9BU20 258 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 FKBP11Q9NYL4 201 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 TCF19Q9Y242 345 aa12.88□□□□□ -0.35
RXRA-202ENST00000481739 C15orf62A8K5M9 175 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 C17orf112F2Z3M2 114 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 MPDU1O75352 247 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 IGHV2-70P01814 119 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 IL3RAP26951 378 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 HSPE1P61604 102 aaKnown RBP12.87□□□□□ -0.35
RXRA-202ENST00000481739 RAB11AP62491 216 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 OR13D1Q8NGV5 346 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 OR9G1Q8NH87 305 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 MBD3L1Q8WWY6 194 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 PCGF1Q9BSM1 259 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 SLC35B3Q9H1N7 401 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 HEYLQ9NQ87 328 aaPredicted RBP12.87□□□□□ -0.35
RXRA-202ENST00000481739 BET1LQ9NYM9 111 aa12.87□□□□□ -0.35
RXRA-202ENST00000481739 TMA7Q9Y2S6 64 aaKnown RBP12.87□□□□□ -0.35
RXRA-202ENST00000481739 J3QR06 171 aa12.86□□□□□ -0.35
RXRA-202ENST00000481739 IL6RP08887 468 aaPredicted RBP12.86□□□□□ -0.35
RXRA-202ENST00000481739 HOXA1P49639 335 aaPredicted RBP12.86□□□□□ -0.35
RXRA-202ENST00000481739 GUCA2BQ16661 112 aa12.86□□□□□ -0.35
RXRA-202ENST00000481739 ATRAIDQ6UW56 229 aa12.86□□□□□ -0.35
RXRA-202ENST00000481739 OR5AN1Q8NGI8 311 aa12.86□□□□□ -0.35
RXRA-202ENST00000481739 OR10X1Q8NGY0 326 aa12.86□□□□□ -0.35
RXRA-202ENST00000481739 SFT2D1Q8WV19 159 aa12.86□□□□□ -0.35
RXRA-202ENST00000481739 ENY2Q9NPA8 101 aa12.86□□□□□ -0.35
RXRA-202ENST00000481739 RBFOX3A6NFN3 312 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 IFNA10P01566 189 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 PPT1P50897 306 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 RAB13P51153 203 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 PDPNQ86YL7 162 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 VKORC1L1Q8N0U8 176 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 ZNF709Q8N972 641 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 TIMD4Q96H15 378 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 RPRMQ9NS64 109 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 MIOXQ9UGB7 285 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 IGHV1-8P0DP01 117 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 MDKP21741 143 aaPredicted RBP12.85□□□□□ -0.35
RXRA-202ENST00000481739 PMS2P11Q13670 270 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 TMEM177Q53S58 311 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.85□□□□□ -0.35
RXRA-202ENST00000481739 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 VSTM2AQ8TAG5 236 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 C8orf46Q8TAG6 207 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 RFNGQ9Y644 331 aa12.85□□□□□ -0.35
RXRA-202ENST00000481739 hCG_1809904A0A1W2PP81 198 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 A0A1W2PPE2 198 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 A0A1W2PR64 198 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 A0A1W2PRV1 198 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 C9JQL5 133 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 H0YJW9 148 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 UPK2O00526 184 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 HSPB1P04792 205 aaKnown RBP12.84□□□□□ -0.35
RXRA-202ENST00000481739 FGF7P21781 194 aa12.84□□□□□ -0.35
RXRA-202ENST00000481739 DLK1P80370 383 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms