RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 ELK1P19419 428 aa12.95□□□□□ -0.34
RXRB-203ENST00000481441 S100A5P33763 92 aa12.95□□□□□ -0.34
RXRB-203ENST00000481441 RPS27AP62979 156 aaKnown RBP12.95□□□□□ -0.34
RXRB-203ENST00000481441 FAM223AQ8IWN6 122 aa12.95□□□□□ -0.34
RXRB-203ENST00000481441 RHBDL2Q9NX52 303 aa12.95□□□□□ -0.34
RXRB-203ENST00000481441 RAB22AQ9UL26 194 aa12.95□□□□□ -0.34
RXRB-203ENST00000481441 SRRM4A7MD48 611 aaKnown RBP12.94□□□□□ -0.34
RXRB-203ENST00000481441 FAM25AB3EWG3 89 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 FAM25CB3EWG5 89 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 FAM25GB3EWG6 89 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 M0R1X1 148 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 APOA1P02647 267 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 PRH1P02810 166 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 RAB6AP20340 208 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 TNFSF8P32971 234 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 ATP5G2Q06055 141 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 TMEM61Q8N0U2 210 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 HARBI1Q96MB7 349 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 CMTM3Q96MX0 182 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 PHB2Q99623 299 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 NICN1Q9BSH3 213 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 TMEM59Q9BXS4 323 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 LPAR5Q9H1C0 372 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 TP53TG1Q9Y2A0 90 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 SELENOKQ9Y6D0 94 aa12.94□□□□□ -0.34
RXRB-203ENST00000481441 LGALS9O00182 355 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 TUSC2O75896 110 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 HLA-DRB3P79483 266 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 CNIH2Q6PI25 160 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 LINC00299Q6ZSB3 139 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 OR52B4Q8NGK2 314 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 CACNG8Q8WXS5 425 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 HDHD3Q9BSH5 251 aaPredicted RBP12.93□□□□□ -0.34
RXRB-203ENST00000481441 ATG5Q9H1Y0 275 aa12.93□□□□□ -0.34
RXRB-203ENST00000481441 RIMS4Q9H426 269 aaPredicted RBP12.93□□□□□ -0.34
RXRB-203ENST00000481441 A0A0A6YYD4 124 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 PPP5D1E7EU14 171 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 HLA-AP01891 365 aaKnown RBP12.92□□□□□ -0.34
RXRB-203ENST00000481441 SCTP09683 121 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 CBLN1P23435 193 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 BMI1P35226 326 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 TMEM177Q53S58 311 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 CCDC190Q86UF4 302 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.92□□□□□ -0.34
RXRB-203ENST00000481441 SRSF12Q8WXF0 261 aaKnown RBP12.92□□□□□ -0.34
RXRB-203ENST00000481441 DIRAS2Q96HU8 199 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 TSC22D3Q99576 134 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 TM2D1Q9BX74 207 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 EXTL2Q9UBQ6 330 aa12.92□□□□□ -0.34
RXRB-203ENST00000481441 IGKV1-6A0A0C4DH72 117 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 SPRY2O43597 315 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 OR2C1O95371 312 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 PRSS8Q16651 343 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 ZNF57Q68EA5 555 aaPredicted RBP12.91□□□□□ -0.34
RXRB-203ENST00000481441 Q6ZWC4 215 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 NECAP1Q8NC96 275 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 S100A16Q96FQ6 103 aaKnown RBP12.91□□□□□ -0.34
RXRB-203ENST00000481441 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
RXRB-203ENST00000481441 PLEKHJ1Q9NW61 149 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 RDH8Q9NYR8 311 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 AK3Q9UIJ7 227 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 MGAT4AQ9UM21 535 aa12.91□□□□□ -0.34
RXRB-203ENST00000481441 METTL21EPA6NDL7 271 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 SHOXO15266 292 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 MPPED1O15442 326 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 GGCTO75223 188 aaKnown RBP12.9□□□□□ -0.34
RXRB-203ENST00000481441 TALDO1P37837 337 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 TNXAQ16473 311 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 FAM209BQ5JX69 171 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 MFSD4AQ8N468 514 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 PHLDA1Q8WV24 401 aaPredicted RBP12.9□□□□□ -0.34
RXRB-203ENST00000481441 Q9N2K0 584 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 MLXQ9UH92 298 aa12.9□□□□□ -0.34
RXRB-203ENST00000481441 TMEM213A2RRL7 107 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 RAB27BO00194 218 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 SOCS1O15524 211 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 ETV6P41212 452 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 DEFB135Q30KP9 77 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 C15orf32Q32M92 178 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 ANKRD55Q3KP44 614 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 SPANXN2Q5MJ10 180 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 FAM89BQ8N5H3 189 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 TEX45Q8NA69 505 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 DIABLOQ9NR28 239 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 SDHAF2Q9NX18 166 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 V9GYH0 126 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 VPS13DQ5THJ4 4388 aa12.89□□□□□ -0.35
RXRB-203ENST00000481441 FABP12A6NFH5 140 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 FOXI3A8MTJ6 420 aaPredicted RBP12.88□□□□□ -0.35
RXRB-203ENST00000481441 XRCC3O43542 346 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 OR2J3O76001 311 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
RXRB-203ENST00000481441 UBE2KP61086 200 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 PRR20EP86478 221 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 PRR20CP86479 221 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 PRR20DP86480 221 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 PRR20BP86481 221 aa12.88□□□□□ -0.35
RXRB-203ENST00000481441 PRR20AP86496 221 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms