RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 C5orf66Q9H5L9 145 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 PLEKHA2Q9HB19 425 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 TMEM140Q9NV12 185 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 ZNF580Q9UK33 172 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 VSIG4Q9Y279 399 aa11.87□□□□□ -0.51
ABCF3-213ENST00000480539 A0A1W2PN81 502 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 MARCH11A6NNE9 402 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 ADARB2-AS1A8MUL3 147 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 H0Y980 276 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 CREBL2O60519 120 aaPredicted RBP11.86□□□□□ -0.51
ABCF3-213ENST00000480539 RPLP1P05386 114 aaKnown RBP11.86□□□□□ -0.51
ABCF3-213ENST00000480539 APELAP0DMC3 54 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 CHRNA7P36544 502 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 ERVK-16P61578 105 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 CD83Q01151 205 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 UNQ5815/PRO19632Q6UWF5 114 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 NDUFA11Q86Y39 141 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 MMD2Q8IY49 270 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 LFNGQ8NES3 379 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 TMEM167AQ8TBQ9 72 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 SRSF12Q8WXF0 261 aaKnown RBP11.86□□□□□ -0.51
ABCF3-213ENST00000480539 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 PHB2Q99623 299 aa11.86□□□□□ -0.51
ABCF3-213ENST00000480539 TSSC4Q9Y5U2 329 aaPredicted RBP11.86□□□□□ -0.51
ABCF3-213ENST00000480539 C3orf85A0A1B0GTC6 90 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 SOX15O60248 233 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 ACTL6BO94805 426 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 KRASP01116 189 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 IGKV1-39P01597 117 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 IGHG4P01861 327 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 OPN1MWP04001 364 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 IGKV1D-39P04432 117 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 SERPINE2P07093 398 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 OPN1MW2P0DN77 364 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 OPN1MW3P0DN78 364 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 MYOD1P15172 320 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 PPIFP30405 207 aaKnown RBP11.85□□□□□ -0.51
ABCF3-213ENST00000480539 G6PCP35575 357 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 FOXE3Q13461 319 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 POU2AF1Q16633 256 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 CXorf66Q5JRM2 361 aaPredicted RBP11.85□□□□□ -0.51
ABCF3-213ENST00000480539 TEX38Q6PEX7 206 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 COMMD1Q8N668 190 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 MINDY2Q8NBR6 621 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 ADAD2Q8NCV1 583 aaKnown RBP11.85□□□□□ -0.51
ABCF3-213ENST00000480539 CASTOR1Q8WTX7 329 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 AIFM2Q9BRQ8 373 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 RTBDNQ9BSG5 229 aaPredicted RBP11.85□□□□□ -0.51
ABCF3-213ENST00000480539 BET1LQ9NYM9 111 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 GPR132Q9UNW8 380 aa11.85□□□□□ -0.51
ABCF3-213ENST00000480539 FOXA2Q9Y261 457 aaPredicted RBP11.85□□□□□ -0.51
ABCF3-213ENST00000480539 TRRAPQ9Y4A5 3859 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 TRAV3A0A0B4J244 114 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 TEX13DA0A0J9YY54 714 aaPredicted RBP11.84□□□□□ -0.51
ABCF3-213ENST00000480539 PF4V1P10720 104 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 RPL23AP62750 156 aaKnown RBP11.84□□□□□ -0.51
ABCF3-213ENST00000480539 RPL8P62917 257 aaKnown RBP11.84□□□□□ -0.51
ABCF3-213ENST00000480539 SP6Q3SY56 376 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 ASPHD1Q5U4P2 390 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 LINC00299Q6ZSB3 139 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 C18orf65Q6ZTR6 163 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 DEDD2Q8WXF8 326 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 TMEM230Q96A57 120 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 NAA60Q9H7X0 242 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 NUBP2Q9Y5Y2 271 aa11.84□□□□□ -0.51
ABCF3-213ENST00000480539 MSGN1A6NI15 193 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 CRYM-AS1A6NIL9 109 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 NUDT19A8MXV4 375 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 UPK2O00526 184 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 ELANEP08246 267 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 OR5AC1P0C628 307 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 OR9G9P0C7N8 305 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 HLA-GP17693 338 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 PSMB8P28062 276 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 RPL27AP46776 148 aaKnown RBP11.83□□□□□ -0.52
ABCF3-213ENST00000480539 CCR6P51684 374 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 OR2B8PP59922 312 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 TMEM267Q0VDI3 215 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-213ENST00000480539 TRIM16LQ309B1 348 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 AKIRIN2Q53H80 203 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 OR4A5Q8NH83 315 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 FAM110DQ8TAY7 271 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-213ENST00000480539 S100ZQ8WXG8 99 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 KLK15Q9H2R5 256 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 FAM212BQ9NTI7 297 aaPredicted RBP11.83□□□□□ -0.52
ABCF3-213ENST00000480539 NSG2Q9Y328 171 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 PLXNB1O43157 2135 aa11.83□□□□□ -0.52
ABCF3-213ENST00000480539 TEX22C9J3V5 150 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 IGLV1-40P01703 118 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 AKR1C4P17516 323 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 CD40LGP29965 261 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 BTCP35070 178 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 DEFA5Q01523 94 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 PRR31Q5SQ13 230 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 TMEM65Q6PI78 240 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 TMED4Q7Z7H5 227 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 KLHL30-AS1Q8NEE0 82 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 SEC22AQ96IW7 307 aa11.82□□□□□ -0.52
ABCF3-213ENST00000480539 SCGB3A2Q96PL1 93 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms