RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SDC2P34741 201 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 ARL3P36405 182 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 RPL8P62917 257 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 KLF5Q13887 457 aaPredicted RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 NEDD8Q15843 81 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 C19orf54Q5BKX5 351 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 C10orf55Q5SWW7 151 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 AADACL3Q5VUY0 350 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 ZNF343Q6P1L6 599 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 SFXN4Q6P4A7 337 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 CLEC19AQ6UXS0 136 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 RBPMS2Q6ZRY4 209 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 Q8N1Y9 231 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 ADAD2Q8NCV1 583 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 BEST4Q8NFU0 473 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 OR13F1Q8NGS4 319 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 OR51H1Q8NH63 302 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 BORCS5Q969J3 196 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 EEF1AKMT3Q96AZ1 226 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 KCTD12Q96CX2 325 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 SLC5A7Q9GZV3 580 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 OR51E2Q9H255 320 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 TXNL4BQ9NX01 149 aaKnown RBP5.41□□□□□ -1.54
COL17A1-205ENST00000480127 THYN1Q9P016 225 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 ZNF257Q9Y2Q1 563 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 KCNK7Q9Y2U2 307 aa5.41□□□□□ -1.54
COL17A1-205ENST00000480127 A8MZ25 164 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 SULT1C2O00338 296 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 PROP1O75360 226 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 RBMXL2O75526 392 aaKnown RBP5.4□□□□□ -1.54
COL17A1-205ENST00000480127 KBTBD11O94819 623 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 TRBV12-3P01733 135 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 HLA-AP01891 365 aaKnown RBP5.4□□□□□ -1.54
COL17A1-205ENST00000480127 REG1AP05451 166 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 GALP22466 123 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 FCGR2CP31995 323 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 MAS1LP35410 378 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 CBX5P45973 191 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 DYRK1AQ13627 763 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 ANKRD55Q3KP44 614 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 TIMM50Q3ZCQ8 353 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 CD300EQ496F6 205 aaPredicted RBP5.4□□□□□ -1.54
COL17A1-205ENST00000480127 OR4A47Q6IF82 309 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 ZNF66Q6ZN08 573 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 Q6ZS49 121 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 SPAG16Q8N0X2 631 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 MFSD4AQ8N468 514 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 OR52B4Q8NGK2 314 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 CD300LFQ8TDQ1 290 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 S100A16Q96FQ6 103 aaKnown RBP5.4□□□□□ -1.54
COL17A1-205ENST00000480127 NEURL2Q9BR09 285 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 ZC4H2Q9NQZ6 224 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 EHFQ9NZC4 300 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 ELF5Q9UKW6 265 aaPredicted RBP5.4□□□□□ -1.54
COL17A1-205ENST00000480127 ETV7Q9Y603 341 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 CEPT1Q9Y6K0 416 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 S4R3C0 116 aa5.4□□□□□ -1.54
COL17A1-205ENST00000480127 SMIM31A0A1B0GVY4 71 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 MEIS3P1A6NDR6 274 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 OR11H12B2RN74 326 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 BMPR1BO00238 502 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 SNAPC5O75971 98 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 SCAF4O95104 1147 aaKnown RBP5.39□□□□□ -1.55
COL17A1-205ENST00000480127 OR2C1O95371 312 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 ATP6V1G2O95670 118 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 HLA-DQB1P01920 261 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 CSN3P07498 182 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 CD37P11049 281 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 FOLR2P14207 255 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 RPA2P15927 270 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 NQO2P16083 231 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 HLA-GP17693 338 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 TSPAN5P62079 268 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 HAGHQ16775 308 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 TMEM69Q5SWH9 247 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 UBE2UQ5VVX9 321 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 ZNF57Q68EA5 555 aaPredicted RBP5.39□□□□□ -1.55
COL17A1-205ENST00000480127 ZNF773Q6PK81 442 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 PLET1Q6UQ28 207 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 CMTM1Q8IZ96 169 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 SLC38A6Q8IZM9 456 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 SPARTQ8N0X7 666 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 UBAC2Q8NBM4 344 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 OR2K2Q8NGT1 345 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 OR5H2Q8NGV7 314 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 CXorf58Q96LI9 332 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 FAM110AQ9BQ89 295 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 YTHDF1Q9BYJ9 559 aaKnown RBP5.39□□□□□ -1.55
COL17A1-205ENST00000480127 SRD5A3Q9H8P0 318 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 TECRQ9NZ01 308 aaKnown RBP5.39□□□□□ -1.55
COL17A1-205ENST00000480127 ADAM30Q9UKF2 790 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 SELENOKQ9Y6D0 94 aa5.39□□□□□ -1.55
COL17A1-205ENST00000480127 IGKV1D-8A0A087WSZ0 117 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.38□□□□□ -1.55
COL17A1-205ENST00000480127 A0A0A6YYH2 397 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 TRBV7-1A0A0A6YYK4 115 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 IGKV1D-13A0A0B4J2D9 117 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 IGHV3-35A0A0C4DH35 117 aa5.38□□□□□ -1.55
COL17A1-205ENST00000480127 A6NJ64 397 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms