RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 LANCL1O43813 399 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 RBP4P02753 201 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 CD3GP09693 182 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 GZMHP20718 246 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 CHATP28329 748 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 SRP14P37108 136 aaKnown RBP5.06□□□□□ -1.6
SF3B1-209ENST00000479532 CEBPGP53567 150 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 RPP30P78346 268 aaKnown RBP5.06□□□□□ -1.6
SF3B1-209ENST00000479532 PAX5Q02548 391 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 ARFRP1Q13795 201 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM241Q24JQ0 296 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 COA6Q5JTJ3 125 aaKnown RBP5.06□□□□□ -1.6
SF3B1-209ENST00000479532 GPR157Q5UAW9 335 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 NCR3LG1Q68D85 454 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 OR52W1Q6IF63 320 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 HEPN1Q6WQI6 88 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF497Q6ZNH5 498 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 MOB1BQ7L9L4 216 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 FAM89BQ8N5H3 189 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 SAMD12Q8N8I0 201 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 LY6G5BQ8NDX9 201 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 OR1S2Q8NGQ3 325 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 TNFRSF14Q92956 283 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 YPEL4Q96NS1 127 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 SLC25A21Q9BQT8 299 aaPredicted RBP5.06□□□□□ -1.6
SF3B1-209ENST00000479532 NICN1Q9BSH3 213 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM208Q9BTX3 173 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 PECRQ9BY49 303 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 HRASLSQ9HDD0 168 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 PARP11Q9NR21 331 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 CACFD1Q9UGQ2 172 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 MMP24Q9Y5R2 645 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 NOTCH2Q04721 2471 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 CSMD1Q96PZ7 3565 aa5.06□□□□□ -1.6
SF3B1-209ENST00000479532 MYO9AB2RTY4 2548 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 AKAP9Q99996 3911 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 FXYD6-FXYD2A0A087WZ82 144 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 A0A0A6YYD4 124 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 TEX13DA0A0J9YY54 714 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-209ENST00000479532 FAM90A9PA6NNJ1 464 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 PPP5D1E7EU14 171 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 TAAR5O14804 337 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 SPINT2O43291 252 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 EIF4EP06730 217 aaKnown RBP5.05□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF728P0DKX0 622 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 NQO2P16083 231 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 HIST1H1DP16402 221 aaKnown RBP5.05□□□□□ -1.6
SF3B1-209ENST00000479532 GLIPR1P48060 266 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 EFNB2P52799 333 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 F2RL1P55085 397 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 OR2B8PP59922 312 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 RBX1P62877 108 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 CYCSP99999 105 aaKnown RBP5.05□□□□□ -1.6
SF3B1-209ENST00000479532 PAX2Q02962 417 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 PAX8Q06710 450 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 USF2Q15853 346 aaPredicted RBP5.05□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM30BQ3MIR4 351 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 MOGAT2Q3SYC2 334 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM69Q5SWH9 247 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 C11orf87Q6NUJ2 197 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 SLC25A24Q6NUK1 477 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 C1orf122Q6ZSJ8 110 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 C6orf201Q7Z4U5 140 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 VMO1Q7Z5L0 202 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 ZNF546Q86UE3 836 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 BAP18Q8IXM2 172 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 ZFP82Q8N141 532 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 FGFRL1Q8N441 504 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 TPRX1Q8N7U7 411 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 OR5M8Q8NGP6 311 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 COQ2Q96H96 371 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 ARHGAP5-AS1Q96IT6 56 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 SMR3AQ99954 134 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 SULT4A1Q9BR01 284 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 FAAP24Q9BTP7 215 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 FXYD6Q9H0Q3 95 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 COMMD9Q9P000 198 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 PITPNC1Q9UKF7 332 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 SETXQ7Z333 2677 aaKnown RBP5.05□□□□□ -1.6
SF3B1-209ENST00000479532 CREBBPQ92793 2442 aa5.05□□□□□ -1.6
SF3B1-209ENST00000479532 TRAV18A0A075B6X5 111 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 KBTBD11-OT1A0A1B0GTJ5 212 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 SMCO3A2RU48 225 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 RNASEK-C17orf49H0YIS7 233 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 ARPC1BO15143 372 aaKnown RBP5.04□□□□□ -1.6
SF3B1-209ENST00000479532 XRCC3O43542 346 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 FCN3O75636 299 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 DFFBO76075 338 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 MT-ND4P03905 459 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 FCGR3AP08637 254 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 IL6RP08887 468 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-209ENST00000479532 CSF1P09603 554 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 GNB3P16520 340 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 CCL3L1P16619 93 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 SRD5A1P18405 259 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 PRTN3P24158 256 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 CDK2P24941 298 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 KIR2DS4P43632 304 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM50BP56557 158 aa5.04□□□□□ -1.6
SF3B1-209ENST00000479532 H2BFSP57053 126 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms