RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 SACSQ9NZJ4 4579 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 CSMD3Q7Z407 3707 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 TRBV9A0A0B4J1U6 114 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 TRAV3A0A0B4J244 114 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 SULT1C2O00338 296 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 OR2A4O95047 310 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 NDUFB8O95169 186 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 TMEM17Q86X19 198 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 PUSL1Q8N0Z8 303 aaKnown RBP13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 TTC9CQ8N5M4 171 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 CACNG8Q8WXS5 425 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 SNAPC3Q92966 411 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 OR2A7Q96R45 310 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 SPIN2AQ99865 258 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 SPIN2BQ9BPZ2 258 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 TM2D3Q9BRN9 247 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 C19orf73Q9NVV2 129 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 FBXL7Q9UJT9 491 aa13.19□□□□□ -0.3
ECHDC1-216ENST00000479525 CGB1A6NKQ9 187 aa13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 C3orf84H3BNL1 204 aa13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 OR2C1O95371 312 aa13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 HSD17B10Q99714 261 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 THAP7Q9BT49 309 aaPredicted RBP13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 SLC5A7Q9GZV3 580 aa13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 AUNIPQ9H7T9 357 aa13.18□□□□□ -0.3
ECHDC1-216ENST00000479525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 DPPA5A6NC42 116 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 FAM223BA6NKX1 122 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 SCGNO76038 276 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 BRI3O95415 125 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 PPYP01298 95 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 TATDN3Q17R31 274 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 CD300EQ496F6 205 aaPredicted RBP13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 CLEC19AQ6UXS0 136 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 HOGA1Q86XE5 327 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 FAM223AQ8IWN6 122 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 SPAG16Q8N0X2 631 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 OR51H1Q8NH63 302 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 TMEM167AQ8TBQ9 72 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 HRASLSQ9HDD0 168 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
ECHDC1-216ENST00000479525 TENM2Q9NT68 2774 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 LYSTQ99698 3801 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 RYR2Q92736 4967 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 H0Y980 276 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 CD7P09564 240 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 HAGHQ16775 308 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 TIMM50Q3ZCQ8 353 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 OR4A47Q6IF82 309 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 LCN12Q6JVE5 192 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 ZNF818PQ6ZRF7 136 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 CCDC140Q96MF4 163 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 FANCD2OSQ96PS1 177 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 TUBA4BQ9H853 241 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 ETV7Q9Y603 341 aa13.16□□□□□ -0.3
ECHDC1-216ENST00000479525 MFSD2BA6NFX1 497 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 SLC22A5O76082 557 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 CD81P60033 236 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 ZNF66Q6ZN08 573 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 NECAP1Q8NC96 275 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 DYNLRB2Q8TF09 96 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 PEMTQ9UBM1 199 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 ZNF257Q9Y2Q1 563 aa13.15□□□□□ -0.3
ECHDC1-216ENST00000479525 IGHV3-35A0A0C4DH35 117 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 S1PR2O95136 353 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 ZNF735P0CB33 412 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 LYL1P12980 280 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 RFX2P48378 723 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 GUCA2BQ16661 112 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 Q8N402 240 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 DEFB125Q8N687 156 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 WDR89Q96FK6 387 aaPredicted RBP13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 PALMDQ9NP74 551 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 SLC2A9Q9NRM0 540 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 EHFQ9NZC4 300 aa13.14□□□□□ -0.31
ECHDC1-216ENST00000479525 C2orf70A6NJV1 201 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 ZNF785A8K8V0 405 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 NPIPB5A8MRT5 1133 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 HRASP01112 189 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 PMP2P02689 132 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 PSMB6P28072 239 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 ARL3P36405 182 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 RPS19P39019 145 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 MECP2P51608 486 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 OR10W1Q8NGF6 305 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 VSTM2AQ8TAG5 236 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 CITED4Q96RK1 184 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 IFT46Q9NQC8 304 aa13.13□□□□□ -0.31
ECHDC1-216ENST00000479525 IGHV3-21A0A0B4J1V1 117 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 FOLR2P14207 255 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 CTRB1P17538 263 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 HLA-GP17693 338 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 KCTD21Q4G0X4 260 aa13.12□□□□□ -0.31
ECHDC1-216ENST00000479525 AADACL3Q5VUY0 350 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms