RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 COL6A6A6NMZ7 2263 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 MYO7BQ6PIF6 2116 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 IGSF23A1L1A6 192 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 PROB1E7EW31 1015 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 OR8B3Q8NGG8 313 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 OR8B2Q96RD0 313 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 CISD1Q9NZ45 108 aaKnown RBP12.14□□□□□ -0.47
COL20A1-206ENST00000479501 NUP210Q8TEM1 1887 aaPredicted RBP12.14□□□□□ -0.47
COL20A1-206ENST00000479501 ZNF785A8K8V0 405 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 IFNL4K9M1U5 179 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 HOXA5P20719 270 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 OR8I2Q8N0Y5 310 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 SMIM8Q96KF7 97 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 FER1L5A0AVI2 2057 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 ZG16O60844 167 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 TAS2R60P59551 318 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 PMCHL1Q16048 86 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 C5orf17Q8NAS9 161 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 OR1B1Q8NGR6 318 aa12.14□□□□□ -0.47
COL20A1-206ENST00000479501 HEATR1Q9H583 2144 aaKnown RBP12.14□□□□□ -0.47
COL20A1-206ENST00000479501 ABCA1O95477 2261 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 ZNF137PP52743 207 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 ACP7Q6ZNF0 438 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 ZNRF1Q8ND25 227 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 MPDU1O75352 247 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 LHFPL1Q86WI0 220 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 RPRMQ9NS64 109 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 UCNP55089 124 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
COL20A1-206ENST00000479501 PARLQ9H300 379 aa12.13□□□□□ -0.47
COL20A1-206ENST00000479501 ETV2O00321 342 aaPredicted RBP12.12□□□□□ -0.47
COL20A1-206ENST00000479501 RIGQ13278 110 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 ATG101Q9BSB4 218 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 FAM157AC9JC47 383 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 CDX4O14627 284 aaPredicted RBP12.12□□□□□ -0.47
COL20A1-206ENST00000479501 OTX1P32242 354 aaPredicted RBP12.12□□□□□ -0.47
COL20A1-206ENST00000479501 LYZP61626 148 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 LEAP2Q969E1 77 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 GRIFINA4D1Z8 144 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 KBTBD11O94819 623 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 QRFPP83859 136 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 ACSF3Q4G176 576 aaPredicted RBP12.12□□□□□ -0.47
COL20A1-206ENST00000479501 LYRM7Q5U5X0 104 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 LEMD1Q68G75 181 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 C12orf54Q6X4T0 127 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 INTS1Q8N201 2190 aaKnown RBP12.12□□□□□ -0.47
COL20A1-206ENST00000479501 IGHV2OR16-5A0A0B4J2B6 119 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 IGKV1D-13A0A0B4J2D9 117 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 IQCF6A8MYZ5 107 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 IGKV1-13P0DP09 117 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 CEACAM1P13688 526 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 OR4X1Q8NH49 305 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 TUBA4BQ9H853 241 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 TMEM140Q9NV12 185 aa12.12□□□□□ -0.47
COL20A1-206ENST00000479501 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 HLA-DQA1P01909 254 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 B3GALT5-AS1P59052 145 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 FAM27E3Q08E93 113 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 TMEM116Q8NCL8 245 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
COL20A1-206ENST00000479501 THYN1Q9P016 225 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 SPRR3Q9UBC9 169 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 DOPEY2Q9Y3R5 2298 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 LY6G6EA0A0G2JKS1 128 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 KIAA1644Q3SXP7 199 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 IDI2-AS1Q9NZ38 188 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 U3KQA8 63 aa12.11□□□□□ -0.47
COL20A1-206ENST00000479501 DIDO1Q9BTC0 2240 aaKnown RBP12.11□□□□□ -0.47
COL20A1-206ENST00000479501 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
COL20A1-206ENST00000479501 HERPUD1Q15011 391 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 STXBP6Q8NFX7 210 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 TMEM250H0YL14 139 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 SS18L1O75177 396 aaPredicted RBP12.1□□□□□ -0.47
COL20A1-206ENST00000479501 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
COL20A1-206ENST00000479501 CTAG1AP78358 180 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 SRSF3P84103 164 aaKnown RBP12.1□□□□□ -0.47
COL20A1-206ENST00000479501 PLPPR1Q8TBJ4 325 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 PCNX2A6NKB5 2137 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 WNT5AP41221 380 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 SUPT4H1P63272 117 aaKnown RBP12.1□□□□□ -0.47
COL20A1-206ENST00000479501 IBA57Q5T440 356 aaKnown RBP12.1□□□□□ -0.47
COL20A1-206ENST00000479501 DCAF16Q9NXF7 216 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 SCGB1D4Q6XE38 83 aa12.1□□□□□ -0.47
COL20A1-206ENST00000479501 DMRTA1Q5VZB9 504 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 RTN4RL2Q86UN3 420 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 PRR7Q8TB68 274 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 TCF19Q9Y242 345 aa12.09□□□□□ -0.47
COL20A1-206ENST00000479501 TRAV24A0A0B4J272 114 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms