RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 DHODHQ02127 395 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 KCTD9Q7L273 389 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 TBC1D26Q86UD7 250 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 FOXRED2Q8IWF2 684 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 OR8H1Q8NGG4 311 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 CASTOR1Q8WTX7 329 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 CLCC1Q96S66 551 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 KLK15Q9H2R5 256 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 TGP01266 2768 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 H7C2Y5 167 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 AP4M1O00189 453 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 IL5P05113 134 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 OR4E1P0C645 316 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 PF4V1P10720 104 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 F2RP25116 425 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 DUTP33316 252 aaKnown RBP13.81□□□□□ -0.2
PTPN7-209ENST00000477554 THBS3P49746 956 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 RAB25P57735 213 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 TAGLNQ01995 201 aaKnown RBP13.81□□□□□ -0.2
PTPN7-209ENST00000477554 EIF4EBP1Q13541 118 aaPredicted RBP13.81□□□□□ -0.2
PTPN7-209ENST00000477554 DEFB136Q30KP8 78 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 C4orf46Q504U0 113 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 TCTEX1D1Q8N7M0 179 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 OR4F17Q8NGA8 305 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 TMEM230Q96A57 120 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 OR4F4Q96R69 305 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 PRELID3BQ9Y3B1 194 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 WASHC3Q9Y3C0 194 aa13.81□□□□□ -0.2
PTPN7-209ENST00000477554 EGR2P11161 476 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-209ENST00000477554 ANXA3P12429 323 aa13.8□□□□□ -0.2
PTPN7-209ENST00000477554 TCTEX1D2Q8WW35 142 aa13.8□□□□□ -0.2
PTPN7-209ENST00000477554 GPHA2Q96T91 129 aa13.8□□□□□ -0.2
PTPN7-209ENST00000477554 FAM103A1Q9BTL3 118 aaKnown RBP13.8□□□□□ -0.2
PTPN7-209ENST00000477554 NAA60Q9H7X0 242 aa13.8□□□□□ -0.2
PTPN7-209ENST00000477554 GPN1Q9HCN4 374 aaPredicted RBP13.8□□□□□ -0.2
PTPN7-209ENST00000477554 PARP11Q9NR21 331 aa13.8□□□□□ -0.2
PTPN7-209ENST00000477554 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 LINC00473A8K010 186 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 RRHO14718 337 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 HLA-AP01891 365 aaKnown RBP13.79□□□□□ -0.2
PTPN7-209ENST00000477554 HLA-DRB1P01911 266 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 VAMP1P23763 118 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 KIR2DS2P43631 304 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 SSBP2P81877 361 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-209ENST00000477554 PPP1R1AQ13522 171 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 PSG5Q15238 335 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 PDLIM3Q53GG5 364 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-209ENST00000477554 KLHL30-AS1Q8NEE0 82 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 OR51H1Q8NH63 302 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 CD300LFQ8TDQ1 290 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 GALNT14Q96FL9 552 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 OR51J1Q9H342 316 aa13.79□□□□□ -0.2
PTPN7-209ENST00000477554 FAM212BQ9NTI7 297 aaPredicted RBP13.79□□□□□ -0.2
PTPN7-209ENST00000477554 C9orf170A2RU37 121 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 SRRM4A7MD48 611 aaKnown RBP13.78□□□□□ -0.2
PTPN7-209ENST00000477554 SOX15O60248 233 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 SFT2D2O95562 160 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 IGLV2-23P01705 113 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 IGF1P05019 195 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 PPIFP30405 207 aaKnown RBP13.78□□□□□ -0.2
PTPN7-209ENST00000477554 PJVKQ0ZLH3 352 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 KIAA0141Q14154 515 aaPredicted RBP13.78□□□□□ -0.2
PTPN7-209ENST00000477554 TATDN3Q17R31 274 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 LIN54Q6MZP7 749 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 LYG2Q86SG7 212 aa13.78□□□□□ -0.2
PTPN7-209ENST00000477554 PIGBOS1A0A0B4J2F0 54 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 H0Y980 276 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 APOA2P02652 100 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 RRASP10301 218 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 MC5RP33032 325 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 RPL30P62888 115 aaKnown RBP13.77□□□□□ -0.21
PTPN7-209ENST00000477554 SUPT4H1P63272 117 aaKnown RBP13.77□□□□□ -0.21
PTPN7-209ENST00000477554 CX3CL1P78423 397 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 CBX3Q13185 183 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 DHRS2Q13268 280 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 MRGPRG-AS1Q2M3A8 158 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 C19orf54Q5BKX5 351 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 KPRPQ5T749 579 aaPredicted RBP13.77□□□□□ -0.21
PTPN7-209ENST00000477554 MRPL41Q8IXM3 137 aaKnown RBP13.77□□□□□ -0.21
PTPN7-209ENST00000477554 LINC00482Q8N8I6 264 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 WFDC9Q8NEX5 89 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 DDB2Q92466 427 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 RAX2Q96IS3 184 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 SLC35D1Q9NTN3 355 aa13.77□□□□□ -0.21
PTPN7-209ENST00000477554 METTL1Q9UBP6 276 aaKnown RBP13.77□□□□□ -0.21
PTPN7-209ENST00000477554 SNRPGP15A8MWD9 76 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 SLC25A17O43808 307 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 CREBL2O60519 120 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-209ENST00000477554 IGHG4P01861 327 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 PF4P02776 101 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 OR5AC1P0C628 307 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 PSMB8P28062 276 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 RPS16P62249 146 aaKnown RBP13.76□□□□□ -0.21
PTPN7-209ENST00000477554 SLC35B1P78383 322 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 RTL8BQ17RB0 113 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 ECSCRQ19T08 205 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 TEX38Q6PEX7 206 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 Q6ZNX1 250 aa13.76□□□□□ -0.21
PTPN7-209ENST00000477554 ZNF431Q8TF32 576 aaPredicted RBP13.76□□□□□ -0.21
PTPN7-209ENST00000477554 KIAA1456Q9P272 454 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms