RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 RPL23AP62750 156 aaKnown RBP13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 MRGPRG-AS1Q2M3A8 158 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 VMA21Q3ZAQ7 101 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 VKORC1L1Q8N0U8 176 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 STPG2Q8N412 459 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 TCTEX1D1Q8N7M0 179 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 TEX45Q8NA69 505 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 CLCC1Q96S66 551 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 PLEKHA2Q9HB19 425 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 COPZ2Q9P299 210 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 LINC00527Q9UJ94 153 aa13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 C14orf166Q9Y224 244 aaKnown RBP13.5□□□□□ -0.25
SMARCD3-210ENST00000477169 NAP1L6A6NFF2 107 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 AP4M1O00189 453 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 S1PR2O95136 353 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 HRASP01112 189 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 LPAR6P43657 344 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 CX3CL1P78423 397 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 PJVKQ0ZLH3 352 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 PPP1R27Q86WC6 154 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 LINC00482Q8N8I6 264 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 CCDC71LQ8N9Z2 235 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 SCGB3A2Q96PL1 93 aa13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 C7orf50Q9BRJ6 194 aaKnown RBP13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 FAM212BQ9NTI7 297 aaPredicted RBP13.49□□□□□ -0.25
SMARCD3-210ENST00000477169 CA2P00918 260 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 BTCP35070 178 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 CCR6P51684 374 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 TAS2R31P59538 309 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 NDPQ00604 133 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 TEX38Q6PEX7 206 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 ZNF562Q6V9R5 426 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 PUSL1Q8N0Z8 303 aaKnown RBP13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 ADAD2Q8NCV1 583 aaKnown RBP13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 RHOVQ96L33 236 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 TP53RKQ96S44 253 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 SLC25A21Q9BQT8 299 aaPredicted RBP13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 GON7Q9BXV9 100 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 OR51J1Q9H342 316 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 COMMD9Q9P000 198 aa13.48□□□□□ -0.25
SMARCD3-210ENST00000477169 C3orf85A0A1B0GTC6 90 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 CENPXA8MT69 81 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 H0Y980 276 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 NQO2P16083 231 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 MYCNOSP40205 109 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 SSBP2P81877 361 aaPredicted RBP13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 POU2AF1Q16633 256 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 PRSS8Q16651 343 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 ETV3LQ6ZN32 361 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 SSX9Q7RTT3 188 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 MRPL41Q8IXM3 137 aaKnown RBP13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 TMEM230Q96A57 120 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 AIFM2Q9BRQ8 373 aa13.47□□□□□ -0.25
SMARCD3-210ENST00000477169 CRYM-AS1A6NIL9 109 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 ARPC1BO15143 372 aaKnown RBP13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 ATP6V0E1O15342 81 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 UPK1BO75841 260 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 OR2A4O95047 310 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 IGKV1-39P01597 117 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 IGKV1D-39P04432 117 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 IGF1P05019 195 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 EGR2P11161 476 aaPredicted RBP13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 VSTM2AQ8TAG5 236 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 TMEM167AQ8TBQ9 72 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 OR2A7Q96R45 310 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 GPR61Q9BZJ8 451 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 NAA60Q9H7X0 242 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 ZNF430Q9H8G1 570 aaPredicted RBP13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 PARP11Q9NR21 331 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 FBXO7Q9Y3I1 522 aa13.46□□□□□ -0.25
SMARCD3-210ENST00000477169 TEX13DA0A0J9YY54 714 aaPredicted RBP13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 NUDT19A8MXV4 375 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 LYRM1O43325 122 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 KBTBD11O94819 623 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 SERPINE2P07093 398 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 IL6RP08887 468 aaPredicted RBP13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 RPA2P15927 270 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 GNB1P62873 340 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 IFITM3Q01628 133 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 FXYD3Q14802 87 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 RBMS2Q15434 407 aaKnown RBP13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 SP6Q3SY56 376 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 OR4A47Q6IF82 309 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 C18orf65Q6ZTR6 163 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 C8orf86Q6ZUL3 223 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 ZNF695Q8IW36 515 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 KLHL30-AS1Q8NEE0 82 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 MCRIP2Q9BUT9 160 aaKnown RBP13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 ZNF580Q9UK33 172 aa13.45□□□□□ -0.26
SMARCD3-210ENST00000477169 TNCP24821 2201 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 MARCH11A6NNE9 402 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 B3GALNT1O75752 331 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 NDUFB6O95139 128 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 KRASP01116 189 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 OR5AC1P0C628 307 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 UCP1P25874 307 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 G6PCP35575 357 aa13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 CRIP2P52943 208 aaPredicted RBP13.44□□□□□ -0.26
SMARCD3-210ENST00000477169 ERVK-16P61578 105 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms