RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 MMD2Q8IY49 270 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 ACOT12Q8WYK0 555 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 RAB3CQ96E17 227 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 DCUN1D5Q9BTE7 237 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 EDA2RQ9HAV5 297 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 ACOT13Q9NPJ3 140 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 CEPT1Q9Y6K0 416 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 V9GY05 133 aa5.53□□□□□ -1.52
BRCA1-214ENST00000477152 KRTAP9-6A0A140TA67 174 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 BET1O15155 118 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 CYB5BO43169 146 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 IGKV1-16P04430 117 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 CD37P11049 281 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 CD36P16671 472 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 CD81P60033 236 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 QRFPP83859 136 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 ARFRP1Q13795 201 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 DGAT2L7PQ6IED9 249 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 SLC16A13Q7RTY0 426 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 NECAP1Q8NC96 275 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 LINC00476Q8WZB0 136 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 FAM3DQ96BQ1 224 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 ARHGAP5-AS1Q96IT6 56 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 FKBP14Q9NWM8 211 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 DNAH9Q9NYC9 4486 aa5.52□□□□□ -1.53
BRCA1-214ENST00000477152 MSGN1A6NI15 193 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 SCGNO76038 276 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 CSN3P07498 182 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 HSMCR30P0CW71 290 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 HIST1H1BP16401 226 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 MYL9P24844 172 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 MAS1LP35410 378 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 C2orf76Q3KRA6 126 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 FAM106AQ4KMX7 169 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 LIPKQ5VXJ0 399 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 OR4A47Q6IF82 309 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 NEURL2Q9BR09 285 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 CABLES2Q9BTV7 478 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 SDHAF2Q9NX18 166 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF257Q9Y2Q1 563 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 AK6Q9Y3D8 172 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 KMT2CQ8NEZ4 4911 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 TRBV6-7A0A0A0MS04 114 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 J3KRW8 73 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 GGCTO75223 188 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 CRYGBP07316 175 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 CALRP27797 417 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 RHOGP84095 191 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 MLLT11Q13015 90 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 EXOSC2Q13868 293 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 CDK10Q15131 360 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 PRSS8Q16651 343 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 GUCA2BQ16661 112 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 C5orf24Q7Z6I8 188 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 ADAD2Q8NCV1 583 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 SRSF12Q8WXF0 261 aaKnown RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 TMEM203Q969S6 136 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 HDHD3Q9BSH5 251 aaPredicted RBP5.51□□□□□ -1.53
BRCA1-214ENST00000477152 VCX3BQ9H321 246 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 BLOC1S6Q9UL45 172 aa5.51□□□□□ -1.53
BRCA1-214ENST00000477152 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.5□□□□□ -1.53
BRCA1-214ENST00000477152 A0A0A6YYD4 124 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 LGALS9O00182 355 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 CRYZL1O95825 349 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 IGLV2-23P01705 113 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 FCGR3AP08637 254 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 PLAC9Q5JTB6 97 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 OGFRL1Q5TC84 451 aaPredicted RBP5.5□□□□□ -1.53
BRCA1-214ENST00000477152 Q6ZS49 121 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 HAPLN4Q86UW8 402 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 TTC9CQ8N5M4 171 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 OR10R2Q8NGX6 335 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 RBMXL1Q96E39 390 aaKnown RBP5.5□□□□□ -1.53
BRCA1-214ENST00000477152 PARP12Q9H0J9 701 aaKnown RBP5.5□□□□□ -1.53
BRCA1-214ENST00000477152 THYN1Q9P016 225 aa5.5□□□□□ -1.53
BRCA1-214ENST00000477152 FOXI3A8MTJ6 420 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 OR11H12B2RN74 326 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 CASQ2O14958 399 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 NDUFB8O95169 186 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 HRASP01112 189 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 GNAO1P09471 354 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 NPSP0C0P6 89 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 DTYMKP23919 212 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 KIR2DS2P43631 304 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 TMEM50BP56557 158 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 ARPC4P59998 168 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 INSL4Q14641 139 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 SLC38A6Q8IZM9 456 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 ZNF645Q8N7E2 425 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 OR4S2Q8NH73 311 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 MARC2Q969Z3 335 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 EEF1AKMT3Q96AZ1 226 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 HSD17B10Q99714 261 aaKnown RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 THAP7Q9BT49 309 aaPredicted RBP5.49□□□□□ -1.53
BRCA1-214ENST00000477152 OR51E2Q9H255 320 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 SRD5A3Q9H8P0 318 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 TRAV1-2A0A0B4J238 106 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 TMEM272A0A1B0GTI8 110 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 KRTAP9-7A8MTY7 169 aa5.49□□□□□ -1.53
BRCA1-214ENST00000477152 PROP1O75360 226 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms