RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SMIM3Q9BZL3 60 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 FBXL17Q9UF56 701 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 HILPDAQ9Y5L2 63 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 ANKRD17O75179 2603 aaKnown RBP11.64□□□□□ -0.55
COL4A6-206ENST00000477085 LEUTXA8MZ59 168 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 UPK2O00526 184 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 TXNL1O43396 289 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 PVALBP20472 110 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-206ENST00000477085 USF1P22415 310 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-206ENST00000477085 MC5RP33032 325 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 ARHGDIBP52566 201 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 VAMP2P63027 116 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 MRGPRG-AS1Q2M3A8 158 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 OR4A16Q8NH70 328 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 ST8SIA2Q92186 375 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 HARBI1Q96MB7 349 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 ZNF471Q9BX82 626 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-206ENST00000477085 TMEM14BQ9NUH8 114 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 WSB1Q9Y6I7 421 aa11.64□□□□□ -0.55
COL4A6-206ENST00000477085 CELSR1Q9NYQ6 3014 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 C15orf61A6NNL5 157 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 TIMM23O14925 209 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 RBMXL2O75526 392 aaKnown RBP11.63□□□□□ -0.55
COL4A6-206ENST00000477085 CST7O76096 145 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 SLC25A16P16260 332 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 CNTFRP26992 372 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 RPS16P62249 146 aaKnown RBP11.63□□□□□ -0.55
COL4A6-206ENST00000477085 PDLIM3Q53GG5 364 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-206ENST00000477085 RPL7L1Q6DKI1 246 aaKnown RBP11.63□□□□□ -0.55
COL4A6-206ENST00000477085 ZNF429Q86V71 674 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 CFHR4Q92496 578 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 MS4A7Q9GZW8 240 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-206ENST00000477085 ZC4H2Q9NQZ6 224 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 PSENENQ9NZ42 101 aa11.63□□□□□ -0.55
COL4A6-206ENST00000477085 FOXA2Q9Y261 457 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-206ENST00000477085 UBE2E1P51965 193 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 ARL16Q0P5N6 197 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 HAPLN4Q86UW8 402 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 LRRC75A-AS1Q8N1F1 130 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 MAPK1IP1LQ8NDC0 245 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 OR52E5Q8NH55 327 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 DTD1Q8TEA8 209 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 C1orf159Q96HA4 380 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 TPSG1Q9NRR2 321 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 BET1LQ9NYM9 111 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 CENPVL3A0A0U1RRI6 287 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 MSMBP08118 114 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 RAB13P51153 203 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 TAS2R30P59541 319 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 SPCS3P61009 180 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 TMEM267Q0VDI3 215 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-206ENST00000477085 HABP2Q14520 560 aaPredicted RBP11.62□□□□□ -0.55
COL4A6-206ENST00000477085 SSX2Q16385 188 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 PIP4P2Q8N4L2 257 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 STOML3Q8TAV4 291 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 MBD6Q96DN6 1003 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 OR4C12Q96R67 309 aa11.62□□□□□ -0.55
COL4A6-206ENST00000477085 PDZD2O15018 2839 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 MED6O75586 246 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 KBTBD11O94819 623 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 IFNA17P01571 189 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 CRYGBP07316 175 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 CD24P25063 80 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 VDAC2P45880 294 aaPredicted RBP11.61□□□□□ -0.55
COL4A6-206ENST00000477085 RPL23AP62750 156 aaKnown RBP11.61□□□□□ -0.55
COL4A6-206ENST00000477085 SPANXN5Q5MJ07 72 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 PCNPQ8WW12 178 aaKnown RBP11.61□□□□□ -0.55
COL4A6-206ENST00000477085 TCF19Q9Y242 345 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 ZFHX3Q15911 3703 aa11.61□□□□□ -0.55
COL4A6-206ENST00000477085 NAV2Q8IVL1 2488 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 TEX50A0A1B0GTY4 177 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 CEBPZOSA8MTT3 80 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 E7EUB6 86 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 TAAR5O14804 337 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 SLC25A17O43808 307 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 VENTXO95231 258 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 OPN1MWP04001 364 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 METTL15P1P0C7V9 234 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 DYNLT3P51808 116 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 UBA52P62987 128 aaKnown RBP11.6□□□□□ -0.55
COL4A6-206ENST00000477085 PJVKQ0ZLH3 352 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 Q5PR19 223 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 TMEM14EPQ6UXP3 125 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 TMEM217Q8N7C4 229 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 SLC25A31Q9H0C2 315 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 OR51B2Q9Y5P1 312 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
COL4A6-206ENST00000477085 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 RNF223E7ERA6 249 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 IFNA7P01567 189 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 CEACAM3P40198 252 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 LGALS7P47929 136 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 HSPE1P61604 102 aaKnown RBP11.59□□□□□ -0.55
COL4A6-206ENST00000477085 OR5C1Q8NGR4 320 aa11.59□□□□□ -0.55
COL4A6-206ENST00000477085 TMEM167AQ8TBQ9 72 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms