RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 OR5B3Q8NH48 314 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 OSR1Q8TAX0 266 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-219ENST00000476625 FAM3DQ96BQ1 224 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 SPIN2AQ99865 258 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 SPIN2BQ9BPZ2 258 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 GINS4Q9BRT9 223 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 ZNF257Q9Y2Q1 563 aa8.85□□□□□ -0.99
HDAC6-219ENST00000476625 PTGES3LE9PB15 166 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 DEFB4AO15263 64 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 ZNF207O43670 478 aaKnown RBP8.84□□□□□ -0.99
HDAC6-219ENST00000476625 ACTL6BO94805 426 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 KBTBD11O94819 623 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 RRASP10301 218 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 RPL27AP46776 148 aaKnown RBP8.84□□□□□ -0.99
HDAC6-219ENST00000476625 KCTD9Q7L273 389 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 APRG1Q8IVJ8 170 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 OR56B1Q8NGI3 324 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 RAB3CQ96E17 227 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 MND1Q9BWT6 205 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 PLCXD1Q9NUJ7 323 aa8.84□□□□□ -0.99
HDAC6-219ENST00000476625 IGHV3-21A0A0B4J1V1 117 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 SMIM30A4D0T7 59 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 DPPA5A6NC42 116 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 NPIPB5A8MRT5 1133 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 CLEC3BP05452 202 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 ZNF735P0CB33 412 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 HSMCR30P0CW71 290 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 CRHBPP24387 322 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 CALRP27797 417 aaKnown RBP8.83□□□□□ -1
HDAC6-219ENST00000476625 PSMB6P28072 239 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 BMI1P35226 326 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 FABP5Q01469 135 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 SPHARQ15513 63 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 OR10R2Q8NGX6 335 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 GATAD1Q8WUU5 269 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 EEF1AKMT3Q96AZ1 226 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 RNF183Q96D59 192 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 OR51E2Q9H255 320 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 FBXL17Q9UF56 701 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 SPATA2Q9UM82 520 aa8.83□□□□□ -1
HDAC6-219ENST00000476625 KLK5Q9Y337 293 aaPredicted RBP8.83□□□□□ -1
HDAC6-219ENST00000476625 IGLV11-55A0A075B6I3 123 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 TRAV3A0A0B4J244 114 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 TNFSF12O43508 249 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 C8orf88P0DMB2 117 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 PTHLHP12272 177 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 MRPS15P82914 257 aaKnown RBP8.82□□□□□ -1
HDAC6-219ENST00000476625 EIF4EBP1Q13541 118 aaPredicted RBP8.82□□□□□ -1
HDAC6-219ENST00000476625 IRF3Q14653 427 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 FAM106AQ4KMX7 169 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 FAM209BQ5JX69 171 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 RBPMS2Q6ZRY4 209 aaKnown RBP8.82□□□□□ -1
HDAC6-219ENST00000476625 Q6ZWC4 215 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 PUSL1Q8N0Z8 303 aaKnown RBP8.82□□□□□ -1
HDAC6-219ENST00000476625 OR2C3Q8N628 320 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 ZNF645Q8N7E2 425 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 TMEM167AQ8TBQ9 72 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 TCTEX1D2Q8WW35 142 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 UFD1Q92890 307 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 ZNF414Q96IQ9 312 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 ADTRPQ96IZ2 230 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 SLC2A9Q9NRM0 540 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 TAS2R8Q9NYW2 309 aa8.82□□□□□ -1
HDAC6-219ENST00000476625 RBMX2Q9Y388 322 aaKnown RBP8.82□□□□□ -1
HDAC6-219ENST00000476625 FAT2Q9NYQ8 4349 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 CRYGCP07315 174 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 HIST1H1DP16402 221 aaKnown RBP8.81□□□□□ -1
HDAC6-219ENST00000476625 MAP2K4P45985 399 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 PSMD7P51665 324 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 APOC4P55056 127 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 ARFRP1Q13795 201 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 ZNF502Q8TBZ5 544 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 OR2A7Q96R45 310 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 TP53TG1Q9Y2A0 90 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 V9GY05 133 aa8.81□□□□□ -1
HDAC6-219ENST00000476625 IGHV3-49A0A0A0MS15 119 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 TFPI2P48307 235 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 TPBGQ13641 420 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 SLC25A42Q86VD7 318 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 NR2C2APQ86WQ0 139 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 OR10W1Q8NGF6 305 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 NUDCD2Q8WVJ2 157 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 MAP6D1Q9H9H5 199 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 RAB22AQ9UL26 194 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 BOLA1Q9Y3E2 137 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 DNAH2Q9P225 4427 aa8.8□□□□□ -1
HDAC6-219ENST00000476625 IGKV3-7A0A075B6H7 116 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 OR2T8A6NH00 312 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 CREBL2O60519 120 aaPredicted RBP8.79□□□□□ -1
HDAC6-219ENST00000476625 FCER2P06734 321 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 CTSDP07339 412 aaPredicted RBP8.79□□□□□ -1
HDAC6-219ENST00000476625 DEFA4P12838 97 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 RCN1Q15293 331 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 ANKRD55Q3KP44 614 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 OR4A47Q6IF82 309 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 STPG3Q8N7X2 389 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 CD300LFQ8TDQ1 290 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 TMEM190Q8WZ59 177 aa8.79□□□□□ -1
HDAC6-219ENST00000476625 CHRDL1Q9BU40 450 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms