RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 IFNA17P01571 189 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 MSMBP08118 114 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 UBE2E1P51965 193 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 SPCS3P61009 180 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 PAX8Q06710 450 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 BAXQ07812 192 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 LDLRAD2Q5SZI1 272 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 HIST2H2BCQ6DN03 193 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 ZNF429Q86V71 674 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 STX12Q86Y82 276 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 PDZD9Q8IXQ8 264 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 PUSL1Q8N0Z8 303 aaKnown RBP11.09□□□□□ -0.63
TRAF4-210ENST00000475329 TMEM252Q8N6L7 170 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 ZNF680Q8NEM1 530 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 OR4A5Q8NH83 315 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 VSTM2AQ8TAG5 236 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 DTD1Q8TEA8 209 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 ST8SIA2Q92186 375 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 CLCC1Q96S66 551 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 PSENENQ9NZ42 101 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 SPG11Q96JI7 2443 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 CR1P17927 2039 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 CRYBG3Q68DQ2 2970 aa11.09□□□□□ -0.63
TRAF4-210ENST00000475329 PTPN13Q12923 2485 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 A0A096LNT2 108 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 SRRM4A7MD48 611 aaKnown RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 B4DSR2 109 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 TIMM23O14925 209 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 KBTBD11O94819 623 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 CFDP00746 253 aaPredicted RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 IL6RP08887 468 aaPredicted RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 LGALS7P47929 136 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 EIF5AP63241 154 aaKnown RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 EXOSC2Q13868 293 aaKnown RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 PDLIM3Q53GG5 364 aaPredicted RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 Q5PR19 223 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 STOML3Q8TAV4 291 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 RBMXL1Q96E39 390 aaKnown RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 C1orf159Q96HA4 380 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 TSNAXQ99598 290 aaKnown RBP11.08□□□□□ -0.64
TRAF4-210ENST00000475329 SMIM3Q9BZL3 60 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 CYTL1Q9NRR1 136 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 TMEM14BQ9NUH8 114 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 UBQLN2Q9UHD9 624 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 HILPDAQ9Y5L2 63 aa11.08□□□□□ -0.64
TRAF4-210ENST00000475329 FBN2P35556 2912 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 H3BP45 60 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 IGLV2-23P01705 113 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 FGF2P09038 288 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 TPT1P13693 172 aaKnown RBP11.07□□□□□ -0.64
TRAF4-210ENST00000475329 NHLH2Q02577 135 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 TMEM267Q0VDI3 215 aaPredicted RBP11.07□□□□□ -0.64
TRAF4-210ENST00000475329 CLEC9AQ6UXN8 241 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 TMEM167AQ8TBQ9 72 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 FKBP11Q9NYL4 201 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 ITGB1BP2Q9UKP3 347 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 TCF19Q9Y242 345 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 ZNF257Q9Y2Q1 563 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 OR51B2Q9Y5P1 312 aa11.07□□□□□ -0.64
TRAF4-210ENST00000475329 BORCS7-ASMTA0A0B4J1R7 106 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 CST7O76096 145 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 GATA3P23771 443 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 CD1BP29016 333 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 HOXA1P49639 335 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-210ENST00000475329 SULT1A1P50225 295 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 HSPE1P61604 102 aaKnown RBP11.06□□□□□ -0.64
TRAF4-210ENST00000475329 LOXL1Q08397 574 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-210ENST00000475329 HABP2Q14520 560 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-210ENST00000475329 SPINK9Q5DT21 86 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 SPANXN5Q5MJ07 72 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 PRSS57Q6UWY2 283 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 LINC01356Q8N9X3 169 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 SCARB1Q8WTV0 552 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 CFHR4Q92496 578 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 BSCL2Q96G97 398 aaPredicted RBP11.06□□□□□ -0.64
TRAF4-210ENST00000475329 RNF5Q99942 180 aa11.06□□□□□ -0.64
TRAF4-210ENST00000475329 STRAPQ9Y3F4 350 aaKnown RBP11.06□□□□□ -0.64
TRAF4-210ENST00000475329 NPFFO15130 113 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 SLC25A17O43808 307 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 JTBO76095 146 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 SCAF4O95104 1147 aaKnown RBP11.05□□□□□ -0.64
TRAF4-210ENST00000475329 VENTXO95231 258 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 RPL8P62917 257 aaKnown RBP11.05□□□□□ -0.64
TRAF4-210ENST00000475329 SSX2Q16385 188 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 RPL7L1Q6DKI1 246 aaKnown RBP11.05□□□□□ -0.64
TRAF4-210ENST00000475329 ALKAL2Q6UX46 152 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 BAP18Q8IXM2 172 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 STPG2Q8N412 459 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 OR1S2Q8NGQ3 325 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 OR5B3Q8NH48 314 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 MALSU1Q96EH3 234 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 HIPK2Q9H2X6 1198 aa11.05□□□□□ -0.64
TRAF4-210ENST00000475329 ENY2Q9NPA8 101 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms