RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 R3HDM4Q96D70 268 aa11.25□□□□□ -0.61
ARHGEF39-203ENST00000475323 OBP2BQ9NPH6 170 aa11.25□□□□□ -0.61
ARHGEF39-203ENST00000475323 DCHS1Q96JQ0 3298 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 TRAV3A0A0B4J244 114 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 K7EN84 100 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 SERF1AO75920 110 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 FOXF2Q12947 444 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 ZBTB34Q8NCN2 500 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 DIRC2Q96SL1 478 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 MGST2Q99735 147 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 MS4A5Q9H3V2 200 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 PAM16Q9Y3D7 125 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 ICE1Q9Y2F5 2266 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 OOEPA6NGQ2 149 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 FCGR3BO75015 233 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 CD99P14209 185 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 IRF2P14316 349 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 TIMP3P35625 211 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 LPAL2Q16609 132 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 FBXW9Q5XUX1 488 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 C11orf53Q8IXP5 236 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 Q8TCH9 128 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 TMEM106BQ9NUM4 274 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 RNF114Q9Y508 228 aa11.24□□□□□ -0.61
ARHGEF39-203ENST00000475323 DLEU1O43261 78 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 LYZL6O75951 148 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 HSPB9Q9BQS6 159 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 TMEM208Q9BTX3 173 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 SPINK4O60575 86 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 YPEL1O60688 119 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 FOXH1O75593 365 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 ZNF90Q03938 601 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 EDDM3AQ14507 147 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 OR10G8Q8NGN5 311 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 YPEL2Q96QA6 119 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 PARD6AQ9NPB6 346 aa11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 RYDENQ9NUL5 291 aaKnown RBP11.23□□□□□ -0.61
ARHGEF39-203ENST00000475323 TNCP24821 2201 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 HOXC12P31275 282 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 OR5I1Q13606 314 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 BATFQ16520 125 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 KRTCAP3Q53RY4 240 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 TPTE2P1Q5T6R2 138 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 DMRTA1Q5VZB9 504 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 VN1R17PQ8TDU5 208 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 FAM122AQ96E09 287 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 C1orf159Q96HA4 380 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 SEPSECSQ9HD40 501 aaKnown RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 HEYLQ9NQ87 328 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 HEATR1Q9H583 2144 aaKnown RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 DUSP3P51452 185 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 SLC35E4Q6ICL7 350 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 GCNT2Q8N0V5 402 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 TAAR6Q96RI8 345 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 GGTLC1Q9BX51 225 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 MRPL18Q9H0U6 180 aaKnown RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 COLQQ9Y215 455 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 SVILO95425 2214 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 CADP27708 2225 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 IER3P46695 156 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 MEOX1P50221 254 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 YPEL3P61236 119 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 RPL31P62899 125 aaKnown RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 UTF1Q5T230 341 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 PRAMEF5Q5TYX0 476 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 KLF14Q8TD94 323 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 HES4Q9HCC6 221 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 FOXJ2Q9P0K8 574 aa11.22□□□□□ -0.61
ARHGEF39-203ENST00000475323 AGFG2O95081 481 aa11.21□□□□□ -0.61
ARHGEF39-203ENST00000475323 STAG3L2P0CL84 134 aa11.21□□□□□ -0.61
ARHGEF39-203ENST00000475323 STAG3L3P0CL85 134 aa11.21□□□□□ -0.61
ARHGEF39-203ENST00000475323 CRISP2P16562 243 aa11.21□□□□□ -0.61
ARHGEF39-203ENST00000475323 MRPS11P82912 194 aaKnown RBP11.21□□□□□ -0.61
ARHGEF39-203ENST00000475323 RPL39P5Q59GN2 51 aa11.21□□□□□ -0.61
ARHGEF39-203ENST00000475323 RAB1CQ92928 201 aa11.21□□□□□ -0.61
ARHGEF39-203ENST00000475323 A8MXE2 369 aa11.21□□□□□ -0.62
ARHGEF39-203ENST00000475323 CIDEAO60543 219 aa11.21□□□□□ -0.62
ARHGEF39-203ENST00000475323 ACP7Q6ZNF0 438 aa11.21□□□□□ -0.62
ARHGEF39-203ENST00000475323 NANOS1Q8WY41 292 aaKnown RBP11.21□□□□□ -0.62
ARHGEF39-203ENST00000475323 FAM103A1Q9BTL3 118 aaKnown RBP11.21□□□□□ -0.62
ARHGEF39-203ENST00000475323 SH3BGRL2Q9UJC5 107 aa11.21□□□□□ -0.62
ARHGEF39-203ENST00000475323 CRYABP02511 175 aaKnown RBP11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 LINC00614P0C842 121 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 SLC35B1P78383 322 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 RNFT1Q5M7Z0 435 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 OR1L6Q8NGR2 347 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 C9orf172C9J069 976 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 FCN1O00602 326 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 DUTP33316 252 aaKnown RBP11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 OPRK1P41145 380 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 ZNF718Q3SXZ3 478 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 ASPHD1Q5U4P2 390 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 BAGE3Q86Y29 109 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 BAGE2Q86Y30 109 aa11.2□□□□□ -0.62
ARHGEF39-203ENST00000475323 IQCF6A8MYZ5 107 aa11.19□□□□□ -0.62
ARHGEF39-203ENST00000475323 IGHV1-2P23083 117 aa11.19□□□□□ -0.62
ARHGEF39-203ENST00000475323 TPPP2P59282 170 aa11.19□□□□□ -0.62
ARHGEF39-203ENST00000475323 UBE2NP61088 152 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms