RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 CHCHD6Q9BRQ6 235 aa5.35□□□□□ -1.55
VPS50-211ENST00000474412 ZFP57Q9NU63 452 aa5.35□□□□□ -1.55
VPS50-211ENST00000474412 SDHAF2Q9NX18 166 aa5.35□□□□□ -1.55
VPS50-211ENST00000474412 KIAA1456Q9P272 454 aa5.35□□□□□ -1.55
VPS50-211ENST00000474412 METTL1Q9UBP6 276 aaKnown RBP5.35□□□□□ -1.55
VPS50-211ENST00000474412 STUB1Q9UNE7 303 aa5.35□□□□□ -1.55
VPS50-211ENST00000474412 WASHC3Q9Y3C0 194 aa5.35□□□□□ -1.55
VPS50-211ENST00000474412 SORL1Q92673 2214 aa5.35□□□□□ -1.55
VPS50-211ENST00000474412 IGHV4OR15-8A0A075B7B6 117 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 A0A087WW49 117 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 TRBV6-7A0A0A0MS04 114 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 IGKV1D-13A0A0B4J2D9 117 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 TRDCB7Z8K6 153 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 I3L521 148 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 ITGB1BP1O14713 200 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 PDCD5O14737 125 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 SSX5O60225 188 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 IGLV2-23P01705 113 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 IGHV3-11P01762 117 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 TFAP2AP05549 437 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 FCER2P06734 321 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 OR8U9P0C7N5 309 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 APELAP0DMC3 54 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 IGKV1-13P0DP09 117 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 CDX1P47902 265 aaPredicted RBP5.34□□□□□ -1.55
VPS50-211ENST00000474412 CRIP2P52943 208 aaPredicted RBP5.34□□□□□ -1.55
VPS50-211ENST00000474412 CX3CL1P78423 397 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 PJVKQ0ZLH3 352 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 ARFRP1Q13795 201 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 PLGLAQ15195 96 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 PSG5Q15238 335 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 MRGPRG-AS1Q2M3A8 158 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 TMEM268Q5VZI3 342 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 SFXN4Q6P4A7 337 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 ZNF773Q6PK81 442 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 H1FOOQ8IZA3 346 aaPredicted RBP5.34□□□□□ -1.55
VPS50-211ENST00000474412 ZNF491Q8N8L2 437 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 OR4A4PQ8NGN8 299 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 OR8U1Q8NH10 309 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 GRPEL2Q8TAA5 225 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 PTX4Q96A99 478 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 CENPOQ9BU64 300 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 ATG5Q9H1Y0 275 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 SLC35D1Q9NTN3 355 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 DAPK2Q9UIK4 370 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 RAB22AQ9UL26 194 aa5.34□□□□□ -1.55
VPS50-211ENST00000474412 RRP15Q9Y3B9 282 aaKnown RBP5.34□□□□□ -1.55
VPS50-211ENST00000474412 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 LOC100506127A0A0U1RQW1 187 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 SRRM4A7MD48 611 aaKnown RBP5.33□□□□□ -1.56
VPS50-211ENST00000474412 SEC14L6B5MCN3 397 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 NFYAP23511 347 aaPredicted RBP5.33□□□□□ -1.56
VPS50-211ENST00000474412 FGF9P31371 208 aaPredicted RBP5.33□□□□□ -1.56
VPS50-211ENST00000474412 SDC2P34741 201 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 KIR2DS1Q14954 304 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 OR2B11Q5JQS5 317 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 C10orf55Q5SWW7 151 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 UNQ5815/PRO19632Q6UWF5 114 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 IDO2Q6ZQW0 420 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 C19orf35Q6ZS72 473 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 PDPNQ86YL7 162 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 MINDY2Q8NBR6 621 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 LFNGQ8NES3 379 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 ARPC1AQ92747 370 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 HARBI1Q96MB7 349 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 MS4A10Q96PG2 267 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 TOLLIPQ9H0E2 274 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 RIMS4Q9H426 269 aaPredicted RBP5.33□□□□□ -1.56
VPS50-211ENST00000474412 ZNF221Q9UK13 617 aa5.33□□□□□ -1.56
VPS50-211ENST00000474412 FOXA2Q9Y261 457 aaPredicted RBP5.33□□□□□ -1.56
VPS50-211ENST00000474412 MEIS3P1A6NDR6 274 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 DUS4LO95620 317 aaKnown RBP5.32□□□□□ -1.56
VPS50-211ENST00000474412 APOA2P02652 100 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 CRYGBP07316 175 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 LGALS1P09382 135 aaKnown RBP5.32□□□□□ -1.56
VPS50-211ENST00000474412 SLC6A1P30531 599 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 DUTP33316 252 aaKnown RBP5.32□□□□□ -1.56
VPS50-211ENST00000474412 RAB9AP51151 201 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 TPPP2P59282 170 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 RPL30P62888 115 aaKnown RBP5.32□□□□□ -1.56
VPS50-211ENST00000474412 ZNF616Q08AN1 781 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 PPP1R27Q86WC6 154 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 GVQW1Q8N7I0 195 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 OR5M8Q8NGP6 311 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 OR10J5Q8NHC4 309 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 DCUN1D4Q92564 292 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 FCGR1BQ92637 280 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 DLX4Q92988 240 aaPredicted RBP5.32□□□□□ -1.56
VPS50-211ENST00000474412 UBE2E2Q96LR5 201 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 GINS4Q9BRT9 223 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 GON7Q9BXV9 100 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.32□□□□□ -1.56
VPS50-211ENST00000474412 RHBDL2Q9NX52 303 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 MGAT4AQ9UM21 535 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 LRRC42Q9Y546 428 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 NUBP2Q9Y5Y2 271 aa5.32□□□□□ -1.56
VPS50-211ENST00000474412 MRPS14O60783 128 aaKnown RBP5.31□□□□□ -1.56
VPS50-211ENST00000474412 RBBP9O75884 186 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 CRYZL1O95825 349 aa5.31□□□□□ -1.56
VPS50-211ENST00000474412 TRBV12-3P01733 135 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms