RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 SSR4P51571 173 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 ARF1P84077 181 aaKnown RBP15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 WDR73Q6P4I2 378 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 LY96Q9Y6Y9 160 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 CEP192Q8TEP8 1941 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 A0A1W2PN81 502 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 BMPR1BO00238 502 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 TNFSF4P23510 183 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 SPATA46Q5T0L3 261 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 MRGPRDQ8TDS7 321 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 TSKUQ8WUA8 353 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 C11orf52Q96A22 123 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 MGST2Q99735 147 aa15.51■□□□□ 0.07
ECHDC1-214ENST00000474289 TRGV10A0A0A0MS01 117 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 OR5B21A6NL26 309 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 M0QZ24 198 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 MPDU1O75352 247 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 NTF3P20783 257 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 GCHFRP30047 84 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 CATR1Q13166 79 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 PDLIM3Q53GG5 364 aaPredicted RBP15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 C19orf35Q6ZS72 473 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 ZBTB34Q8NCN2 500 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 OR4F17Q8NGA8 305 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 GGTLC1Q9BX51 225 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 CLEC7AQ9BXN2 247 aa15.5■□□□□ 0.07
ECHDC1-214ENST00000474289 IGHV1-69-2A0A0G2JMI3 117 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 ANKRD30BLA7E2S9 258 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 PPBPP02775 128 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 STUMQ69YW2 141 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 MRPL14Q6P1L8 145 aaKnown RBP15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 BORCS7Q96B45 105 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 IGHV5-10-1A0A0J9YXX1 117 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 IGLC7A0M8Q6 106 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 RAC2P15153 192 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 LINC00205P59089 165 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 NRN1LQ496H8 165 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 VASH2Q86V25 355 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 OR5B3Q8NH48 314 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 LOXL4Q96JB6 756 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 POM121L2Q96KW2 1035 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 PKIBQ9C010 78 aa15.49■□□□□ 0.07
ECHDC1-214ENST00000474289 SRD5A2P31213 254 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 DOCK7Q96N67 2140 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 IGHV1-45A0A0A0MS14 117 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 WISP2O76076 250 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 TCL1AP56279 114 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 SPATA31B1PQ5VZV4 182 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 RNASE7Q9H1E1 156 aaKnown RBP15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 MS4A5Q9H3V2 200 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 SEPSECSQ9HD40 501 aaKnown RBP15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 OCIAD1Q9NX40 245 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 CDC42EP3Q9UKI2 254 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 MPC1Q9Y5U8 109 aa15.48■□□□□ 0.07
ECHDC1-214ENST00000474289 J3QT63 122 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 FOXG1P55316 489 aaPredicted RBP15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 CLDN18P56856 261 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 RPL19P84098 196 aaKnown RBP15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 FXYD3Q14802 87 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 PMCHL1Q16048 86 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 CENPWQ5EE01 88 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 DOLPP1Q86YN1 238 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 RFPL3SP0C7P2 107 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 RAB30Q15771 203 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 PNKDQ8N490 385 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 ZNF439Q8NDP4 499 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 OR52L2PQ8NGH6 319 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 SSMEM1Q8WWF3 244 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 IMMP1LQ96LU5 166 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 VPS13AQ96RL7 3174 aa15.47■□□□□ 0.07
ECHDC1-214ENST00000474289 LOC102723996A0A087X1L8 192 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 OR10J4P0C629 311 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 MRPL54Q6P161 138 aaKnown RBP15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 MUC15Q8N387 334 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 R4GN57 208 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 TRAV30A0A087WSZ9 112 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 LINC00473A8K010 186 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 CDIPTO14735 213 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 MRPL33O75394 65 aaKnown RBP15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 FOXH1O75593 365 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 COX6A1P12074 109 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 GNG4P50150 75 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 RHOBP62745 196 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 WIPI1Q5MNZ9 446 aaPredicted RBP15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 GALMQ96C23 342 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 HES4Q9HCC6 221 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 RNF24Q9Y225 148 aa15.46■□□□□ 0.07
ECHDC1-214ENST00000474289 TRAV9-2A0A087WT02 112 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 HLA-DQA1P01909 254 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 AMY1AP04745 511 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 OR9G9P0C7N8 305 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 IGLL1P15814 213 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 EFNB3Q15768 340 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 VAMP3Q15836 100 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 ERASQ7Z444 233 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 CELSR3Q9NYQ7 3312 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 HCFC1P51610 2035 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 C12orf77C9JDV5 145 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 COX19Q49B96 90 aa15.45■□□□□ 0.06
ECHDC1-214ENST00000474289 PQLC2Q6ZP29 291 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms