RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 E5RGE8 158 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 SSSCA1O60232 199 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 CNIH1O95406 144 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 MPC2O95563 127 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 RPL23AP62750 156 aaKnown RBP8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 GNB1P62873 340 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 RPL8P62917 257 aaKnown RBP8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 RAB32Q13637 225 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 POU2AF1Q16633 256 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 C11orf87Q6NUJ2 197 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 NOXA1Q86UR1 476 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 TEX45Q8NA69 505 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 ABHD5Q8WTS1 349 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 CFHR4Q92496 578 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 SSX3Q99909 188 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 RASL11BQ9BPW5 248 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 NSG2Q9Y328 171 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 OR51B2Q9Y5P1 312 aa8.27□□□□□ -1.09
PRPF38A-202ENST00000474048 SMLR1H3BR10 107 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 UPK2O00526 184 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 RRHO14718 337 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 SYNGR2O43760 224 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 CD99P14209 185 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 CD24P25063 80 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 MAS1LP35410 378 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 CAV2P51636 162 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 DYNLT3P51808 116 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 BRWD1-AS2P59051 145 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 SPCS3P61009 180 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 SRSF4Q08170 494 aaKnown RBP8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 HABP2Q14520 560 aaPredicted RBP8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 PSG5Q15238 335 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 TNXAQ16473 311 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 IZUMO4Q1ZYL8 232 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 FAM120AOSQ5T036 256 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 PRSS54Q6PEW0 395 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 ZNF546Q86UE3 836 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 THNSL2Q86YJ6 484 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 OR4D5Q8NGN0 318 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 OR5B3Q8NH48 314 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 OR5R1Q8NH85 324 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 EAF1Q96JC9 268 aaPredicted RBP8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 RAB40CQ96S21 281 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 MEGF9Q9H1U4 602 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 PLEKHA3Q9HB20 300 aa8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 PAIP2BQ9ULR5 123 aaKnown RBP8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 RCL1Q9Y2P8 373 aaKnown RBP8.26□□□□□ -1.09
PRPF38A-202ENST00000474048 A0A0G2JRQ6 117 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 A0A1W2PN81 502 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 H3BUX3 64 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 K7EPK0 472 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 M0QZK8 103 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 ARPC5O15511 151 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 DEDDO75618 318 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 SCAF4O95104 1147 aaKnown RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 AVPP01185 164 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 MBPP02686 304 aaPredicted RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 OR9G9P0C7N8 305 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 PAX6P26367 422 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 CHRNA7P36544 502 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 TNFRSF9Q07011 255 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 AANATQ16613 207 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 KLF17Q5JT82 389 aaPredicted RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 ZNF429Q86V71 674 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 PPP1R27Q86WC6 154 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 STX12Q86Y82 276 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 PUSL1Q8N0Z8 303 aaKnown RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 FAM71E2Q8N5Q1 922 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 OR1L8Q8NGR8 309 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 TMEM167AQ8TBQ9 72 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 DTD1Q8TEA8 209 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 C17orf50Q8WW18 174 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 C22orf15Q8WYQ4 148 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 WDR89Q96FK6 387 aaPredicted RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 QTRT1Q9BXR0 403 aaKnown RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 SLC25A31Q9H0C2 315 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 MAGT1Q9H0U3 335 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 FBXL15Q9H469 300 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 HEYLQ9NQ87 328 aaPredicted RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 MBD2Q9UBB5 411 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 FOXA2Q9Y261 457 aaPredicted RBP8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 ZNF257Q9Y2Q1 563 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 MOB4Q9Y3A3 225 aa8.25□□□□□ -1.09
PRPF38A-202ENST00000474048 CREBBPQ92793 2442 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 MED13LQ71F56 2210 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 BOLA2-SMG1P6H3BVE0 249 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 CYB5BO43169 146 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 IAPPP10997 89 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 SLC25A4P12235 298 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 FOSL1P15407 271 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 SNCAP37840 140 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 RPL27AP46776 148 aaKnown RBP8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 AP2S1P53680 142 aaPredicted RBP8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 HSPE1P61604 102 aaKnown RBP8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 POLR2GP62487 172 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 ERHP84090 104 aaKnown RBP8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 RELBQ01201 579 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 DEFB112Q30KQ8 113 aa8.24□□□□□ -1.09
PRPF38A-202ENST00000474048 CXorf66Q5JRM2 361 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms