RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 HRASP01112 189 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 IGHV3-11P01762 117 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 MYOD1P15172 320 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 PHLDA2Q53GA4 152 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 PDLIM3Q53GG5 364 aaPredicted RBP14.66□□□□□ -0.06
PTCD3-210ENST00000473829 RNASE10Q5GAN6 216 aaKnown RBP14.66□□□□□ -0.06
PTCD3-210ENST00000473829 OR4A47Q6IF82 309 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 MCFD2Q8NI22 146 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 VSTM2AQ8TAG5 236 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 C15orf40Q8WUR7 153 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 PHB2Q99623 299 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 RSRP1Q9BUV0 290 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 ZNF355PQ9NSJ1 428 aa14.66□□□□□ -0.06
PTCD3-210ENST00000473829 E7EUB6 86 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 CREBL2O60519 120 aaPredicted RBP14.65□□□□□ -0.06
PTCD3-210ENST00000473829 RBMXL2O75526 392 aaKnown RBP14.65□□□□□ -0.06
PTCD3-210ENST00000473829 HPRT1P00492 218 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 TRGV3P03979 118 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 CD74P04233 296 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 LGALS1P09382 135 aaKnown RBP14.65□□□□□ -0.06
PTCD3-210ENST00000473829 IL18Q14116 193 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 LHFPL1Q86WI0 220 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 TMEM229BQ8NBD8 167 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 ADAD2Q8NCV1 583 aaKnown RBP14.65□□□□□ -0.06
PTCD3-210ENST00000473829 OR1N2Q8NGR9 330 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 SMIM4Q8WVI0 70 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 TMEM68Q96MH6 324 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 SLA2Q9H6Q3 261 aa14.65□□□□□ -0.06
PTCD3-210ENST00000473829 TRAV3A0A0B4J244 114 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 TEX22C9J3V5 150 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 H3BUA1 57 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 ACTL6BO94805 426 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 RPA2P15927 270 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 TBPP20226 339 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 TNFSF8P32971 234 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 UCP3P55916 312 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 TAS2R31P59538 309 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 MRPS10P82664 201 aaKnown RBP14.64□□□□□ -0.07
PTCD3-210ENST00000473829 ZNF616Q08AN1 781 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 POU2AF1Q16633 256 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 ZNF585BQ52M93 769 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 CMTM1Q8IZ96 169 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 DGCR14Q96DF8 476 aaKnown RBP14.64□□□□□ -0.07
PTCD3-210ENST00000473829 PLEKHA2Q9HB19 425 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 COA4Q9NYJ1 87 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 BET1LQ9NYM9 111 aa14.64□□□□□ -0.07
PTCD3-210ENST00000473829 RSL24D1Q9UHA3 163 aaKnown RBP14.64□□□□□ -0.07
PTCD3-210ENST00000473829 IGHV4OR15-8A0A075B7B6 117 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 A0A087WW49 117 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 HMX3A6NHT5 357 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 CGB1A6NKQ9 187 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 CTDSPLO15194 276 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 DUS4LO95620 317 aaKnown RBP14.63□□□□□ -0.07
PTCD3-210ENST00000473829 IL6RP08887 468 aaPredicted RBP14.63□□□□□ -0.07
PTCD3-210ENST00000473829 OR9G9P0C7N8 305 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 NQO2P16083 231 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 F2RP25116 425 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 CD40LGP29965 261 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 HOXD3P31249 432 aaPredicted RBP14.63□□□□□ -0.07
PTCD3-210ENST00000473829 TAS2R19P59542 299 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 FAAP20Q6NZ36 180 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 C19orf35Q6ZS72 473 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 SLC38A6Q8IZM9 456 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 ARRDC1Q8N5I2 433 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 CD300LFQ8TDQ1 290 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 SPIN2AQ99865 258 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 SPIN2BQ9BPZ2 258 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 SOSTQ9BQB4 213 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 COMMD9Q9P000 198 aa14.63□□□□□ -0.07
PTCD3-210ENST00000473829 MPPED1O15442 326 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 BRI3O95415 125 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 PRH1P02810 166 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 IFNA6P05013 189 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 PI3P19957 117 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 LPAR6P43657 344 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 RPL27AP46776 148 aaKnown RBP14.62□□□□□ -0.07
PTCD3-210ENST00000473829 PPP5CP53041 499 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 SLURP1P55000 103 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 KRTAP10-11P60412 298 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 RPL8P62917 257 aaKnown RBP14.62□□□□□ -0.07
PTCD3-210ENST00000473829 STEAP1BQ6NZ63 245 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 LPCAT3Q6P1A2 487 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 TBC1D26Q86UD7 250 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 MRGPRFQ96AM1 343 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 HRASLSQ9HDD0 168 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 TMEM140Q9NV12 185 aa14.62□□□□□ -0.07
PTCD3-210ENST00000473829 AURKAIP1Q9NWT8 199 aaPredicted RBP14.62□□□□□ -0.07
PTCD3-210ENST00000473829 UPK2O00526 184 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 RAB3DO95716 219 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 OR8U8P0C7N1 319 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 ZNF735P0CB33 412 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 HLA-GP17693 338 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 MAS1LP35410 378 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 ZNF45Q02386 682 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 SSBP1Q04837 148 aaKnown RBP14.61□□□□□ -0.07
PTCD3-210ENST00000473829 DMBX1Q8NFW5 382 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 OR4A5Q8NH83 315 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 FYTTD1Q96QD9 318 aaKnown RBP14.61□□□□□ -0.07
PTCD3-210ENST00000473829 SLC2A9Q9NRM0 540 aa14.61□□□□□ -0.07
PTCD3-210ENST00000473829 MARCH11A6NNE9 402 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms