RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 FBXO7Q9Y3I1 522 aa5.49□□□□□ -1.53
CKS1B-205ENST00000473344 R4GMQ9 66 aa5.49□□□□□ -1.53
CKS1B-205ENST00000473344 A0A1B0GW64 132 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 SHISA3A0PJX4 238 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 C7orf77A4D0Y5 90 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 OOSP1A8MZH6 123 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 H3BSH0 61 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 BUB1B-PAK6H3BSN5 160 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 SH2D1BO14796 132 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 HSPA12AO43301 675 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 PSPNO60542 156 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 MMP23AO75900 390 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 JTBO76095 146 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 RPP14O95059 124 aaKnown RBP5.48□□□□□ -1.53
CKS1B-205ENST00000473344 ZFPL1O95159 310 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 IGLV1-47P01700 117 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 GAPDHP04406 335 aaKnown RBP5.48□□□□□ -1.53
CKS1B-205ENST00000473344 AMY1AP04745 511 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 AMY2AP04746 511 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 HCKP08631 526 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 GTF2F2P13984 249 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 ADCYAP1P18509 176 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 SRMP19623 302 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 DUSP1P28562 367 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 OR3A4PP47883 348 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 SULT1A2P50226 295 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 RANP62826 216 aaKnown RBP5.48□□□□□ -1.53
CKS1B-205ENST00000473344 HES1Q14469 280 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 CDK5R1Q15078 307 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 UBE2V2Q15819 145 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 SPIN3Q5JUX0 258 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 TPTE2P1Q5T6R2 138 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 STEAP1BQ6NZ63 245 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 HEPN1Q6WQI6 88 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 FOXRED2Q8IWF2 684 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 FAM58AQ8N1B3 248 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 OR52N4Q8NGI2 321 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 OR4D6Q8NGJ1 314 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 OR10R2Q8NGX6 335 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 OR4K15Q8NH41 348 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 RNASEH2CQ8TDP1 164 aaKnown RBP5.48□□□□□ -1.53
CKS1B-205ENST00000473344 RPEQ96AT9 228 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 FAM212BQ9NTI7 297 aaPredicted RBP5.48□□□□□ -1.53
CKS1B-205ENST00000473344 CACFD1Q9UGQ2 172 aa5.48□□□□□ -1.53
CKS1B-205ENST00000473344 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
CKS1B-205ENST00000473344 TRAV14DV4A0A0A6YYC5 116 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 BORCS7-ASMTA0A0B4J1R7 106 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 TRBV2A0A0J9YWF9 115 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 PRR32B1ATL7 298 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 PPP5D1E7EU14 171 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 J3QLW9 94 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 SIRPB1O00241 398 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ITGB1BP1O14713 200 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 SRSF10O75494 262 aaKnown RBP5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ZNF19P17023 458 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 TMEM11P17152 192 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 BCL3P20749 454 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 NFYBP25208 207 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 OR3A1P47881 315 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 NPBWR2P48146 333 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ATP1B3P54709 279 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 MTCP1P56278 107 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 TNFRSF9Q07011 255 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 AESQ08117 197 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ZNF146Q15072 292 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 HLA-DRB5Q30154 266 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 RNASE12Q5GAN4 147 aaKnown RBP5.47□□□□□ -1.53
CKS1B-205ENST00000473344 PYY3Q5JQD4 70 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ZNF529Q6P280 563 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 FAM220AQ7Z4H9 259 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 SLC35E3Q7Z769 313 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 LYG2Q86SG7 212 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 TGIF2LXQ8IUE1 241 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ZNF695Q8IW36 515 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 SLC35F2Q8IXU6 374 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 CCDC54Q8NEL0 328 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 OR5T1Q8NG75 326 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 OR5AK2Q8NH90 309 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 GPR148Q8TDV2 347 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 DCUN1D4Q92564 292 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 GHSRQ92847 366 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 TOMM40LQ969M1 308 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 GALNT14Q96FL9 552 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 DUX3Q96PT4 197 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 CLCC1Q96S66 551 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ASCL2Q99929 193 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ACTR3CQ9C0K3 210 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-205ENST00000473344 AUNIPQ9H7T9 357 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 ZNF286AQ9HBT8 521 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 SLC2A8Q9NY64 477 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 IL36RNQ9UBH0 155 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 LINC00527Q9UJ94 153 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 HHLA2Q9UM44 414 aa5.47□□□□□ -1.53
CKS1B-205ENST00000473344 AMMECR1Q9Y4X0 333 aaPredicted RBP5.47□□□□□ -1.53
CKS1B-205ENST00000473344 DYNC2H1Q8NCM8 4307 aaKnown RBP5.47□□□□□ -1.53
CKS1B-205ENST00000473344 NOTCH3Q9UM47 2321 aa5.46□□□□□ -1.54
CKS1B-205ENST00000473344 IGKV1-27A0A075B6S5 117 aa5.46□□□□□ -1.54
CKS1B-205ENST00000473344 A0A1W2PPQ1 181 aa5.46□□□□□ -1.54
CKS1B-205ENST00000473344 CCL24O00175 119 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms