RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 TAF15Q92804 592 aaKnown RBP eCLIP4□□□□□ -1.77
TM4SF1-202ENST00000472441 RHOVQ96L33 236 aa4□□□□□ -1.77
TM4SF1-202ENST00000472441 CLCC1Q96S66 551 aa4□□□□□ -1.77
TM4SF1-202ENST00000472441 WDR61Q9GZS3 305 aaKnown RBP4□□□□□ -1.77
TM4SF1-202ENST00000472441 RPS10P5Q9NQ39 176 aa4□□□□□ -1.77
TM4SF1-202ENST00000472441 TMEM140Q9NV12 185 aa4□□□□□ -1.77
TM4SF1-202ENST00000472441 CARHSP1Q9Y2V2 147 aaKnown RBP4□□□□□ -1.77
TM4SF1-202ENST00000472441 TEP1Q99973 2627 aaKnown RBP4□□□□□ -1.77
TM4SF1-202ENST00000472441 ZFP92A6NM28 416 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 H7C2Y5 167 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 FCN3O75636 299 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 MYOD1P15172 320 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 FGF7P21781 194 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 COL8A2P25067 703 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 PAX6P26367 422 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 RAB2AP61019 212 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 HFEQ30201 348 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 C10orf91Q5T1B1 145 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 TMEM200BQ69YZ2 307 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 MUC15Q8N387 334 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 COMMD1Q8N668 190 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ZNF383Q8NA42 475 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 CLRN3Q8NCR9 226 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ST6GALNAC3Q8NDV1 305 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 OR4S2Q8NH73 311 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 C17orf50Q8WW18 174 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ZNF714Q96N38 554 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 CIB3Q96Q77 187 aaPredicted RBP3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 AIFM2Q9BRQ8 373 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 HIPK2Q9H2X6 1198 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 GNG13Q9P2W3 67 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 RPUSD1Q9UJJ7 312 aaKnown RBP3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 PUS1Q9Y606 427 aaKnown RBP eCLIP3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 LINC00312Q9Y6C7 94 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 B9A039 149 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 FAM157AC9JC47 383 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 DAOP14920 347 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 HOXA1P49639 335 aaPredicted RBP3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 THBS3P49746 956 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ADORA2A-AS1P86434 159 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 TFF3Q07654 80 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SSX8Q7RTT4 187 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 IQCF2Q8IXL9 164 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 LFNGQ8NES3 379 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ZNF251Q9BRH9 671 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SCRT1Q9BWW7 348 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SLC35B3Q9H1N7 401 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 GAL3ST2Q9H3Q3 398 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SLC35D1Q9NTN3 355 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 CTSZQ9UBR2 303 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 KPTNQ9Y664 436 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 LOC105371267A0A1B0GV96 52 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 RRHO14718 337 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SIAH2O43255 324 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 IGKV1-16P04430 117 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 IFNA4P05014 189 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 OR8U8P0C7N1 319 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 CT45A6P0DMU7 189 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 CT45A5P0DMU8 189 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 CT45A7P0DMV0 189 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SPCS3P61009 180 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 RELBQ01201 579 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SOHLH1Q5JUK2 328 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 AVPI1Q5T686 147 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ZNF787Q6DD87 383 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 OR4A47Q6IF82 309 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SSX7Q7RTT5 188 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ZNF709Q8N972 641 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ZNF439Q8NDP4 499 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 OR10X1Q8NGY0 326 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 ZCCHC14Q8WYQ9 949 aaKnown RBP3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 DDB2Q92466 427 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 CORO2AQ92828 525 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 PINX1Q96BK5 328 aaKnown RBP3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 TMEM147Q9BVK8 224 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 NCOR1P1Q9H4R4 102 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 SLC39A9Q9NUM3 307 aa3.99□□□□□ -1.77
TM4SF1-202ENST00000472441 TET2Q6N021 2002 aaPredicted RBP3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 C15orf62A8K5M9 175 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 PMS2P5A8MQ11 134 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 HBE1P02100 147 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 DEFA4P12838 97 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 KIR2DS2P43631 304 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 MEF2CQ06413 473 aaPredicted RBP3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 DIAPH2-AS1Q14236 149 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 ZNF726P1Q15940 193 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 FFAR4Q5NUL3 377 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 SLC25A48Q6ZT89 311 aaKnown RBP3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 OR13D1Q8NGV5 346 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 RCC1LQ96I51 464 aaKnown RBP3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 SLC25A22Q9H936 323 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 ENY2Q9NPA8 101 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 TCF19Q9Y242 345 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 ITPR3Q14573 2671 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 SRRM4A7MD48 611 aaKnown RBP3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 ITGB1BP1O14713 200 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 RBFOX2O43251 390 aaKnown RBP eCLIP3.98□□□□□ -1.771e-12■□□□□ 10.5
TM4SF1-202ENST00000472441 PPIHO43447 177 aaKnown RBP3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 HRASP01112 189 aa3.98□□□□□ -1.77
TM4SF1-202ENST00000472441 RPP30P78346 268 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms