RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ATP5G2Q06055 141 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 RPEL1Q2QD12 228 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 UBE2NLQ5JXB2 153 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 C19orf35Q6ZS72 473 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 SSX9Q7RTT3 188 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 TMEM17Q86X19 198 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 CROCCP3Q8IVE0 287 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 Q8N1Y9 231 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 SAMD12Q8N8I0 201 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 NECAP1Q8NC96 275 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 TSPAN14Q8NG11 270 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 OR5AP2Q8NGF4 316 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 OR2A7Q96R45 310 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 SLC5A7Q9GZV3 580 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 VCX3AQ9NNX9 186 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 ZNF257Q9Y2Q1 563 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 NPIPB5A8MRT5 1133 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 SULT1C2O00338 296 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 OR2J3O76001 311 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 HRASP01112 189 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 CSN3P07498 182 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 ZNF735P0CB33 412 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 MYOD1P15172 320 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 MAS1LP35410 378 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 C15orf32Q32M92 178 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 ZNF818PQ6ZRF7 136 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 SLC25A42Q86VD7 318 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 SPAG16Q8N0X2 631 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 ZBTB34Q8NCN2 500 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 GIMAP1Q8WWP7 306 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 S100A16Q96FQ6 103 aaKnown RBP6.87□□□□□ -1.31
USF1-204ENST00000472217 FYTTD1Q96QD9 318 aaKnown RBP6.87□□□□□ -1.31
USF1-204ENST00000472217 IFT46Q9NQC8 304 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 SLC2A9Q9NRM0 540 aa6.87□□□□□ -1.31
USF1-204ENST00000472217 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.86□□□□□ -1.31
USF1-204ENST00000472217 DPPA5A6NC42 116 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 CGB1A6NKQ9 187 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 PPP5D1E7EU14 171 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 H0Y980 276 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 RBFOX2O43251 390 aaKnown RBP eCLIP6.86□□□□□ -1.31
USF1-204ENST00000472217 IGHV4-30-4P0DP06 118 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 AREGP15514 252 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 HLA-GP17693 338 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 RFX2P48378 723 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 TAS2R20P59543 309 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 HERV-K104P61576 105 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 RPL8P62917 257 aaKnown RBP6.86□□□□□ -1.31
USF1-204ENST00000472217 CATR1Q13166 79 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 TATDN3Q17R31 274 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 TMEM69Q5SWH9 247 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 OR4A47Q6IF82 309 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 OR51H1Q8NH63 302 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 RCHY1Q96PM5 261 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 FANCD2OSQ96PS1 177 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 HRASLSQ9HDD0 168 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 BET1LQ9NYM9 111 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 SIGLEC8Q9NYZ4 499 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 EHFQ9NZC4 300 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 PEMTQ9UBM1 199 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 FBXL7Q9UJT9 491 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 ANAPC10Q9UM13 185 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 DMRT1Q9Y5R6 373 aa6.86□□□□□ -1.31
USF1-204ENST00000472217 TRAV3A0A0B4J244 114 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 IZUMO1RA6ND01 250 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 S1PR2O95136 353 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 NDUFB8O95169 186 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 HPRT1P00492 218 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 HLA-AP01891 365 aaKnown RBP6.85□□□□□ -1.31
USF1-204ENST00000472217 REG1AP05451 166 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 EIF4EP06730 217 aaKnown RBP6.85□□□□□ -1.31
USF1-204ENST00000472217 CRYGCP07315 174 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 NAT1P18440 290 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 PSMB6P28072 239 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 GNRHRP30968 328 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 TAS2R31P59538 309 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 NCS1P62166 190 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 POU2AF1Q16633 256 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 AADACL3Q5VUY0 350 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 LCN12Q6JVE5 192 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 ADAMTSL5Q6ZMM2 481 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 SGPP2Q8IWX5 399 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 Q8N402 240 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 OR4A5Q8NH83 315 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 SLC25A46Q96AG3 418 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 CCDC140Q96MF4 163 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 AIFM2Q9BRQ8 373 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 ZNF2Q9BSG1 426 aaPredicted RBP6.85□□□□□ -1.31
USF1-204ENST00000472217 THAP7Q9BT49 309 aaPredicted RBP6.85□□□□□ -1.31
USF1-204ENST00000472217 FUNDC2Q9BWH2 189 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 S4R3C0 116 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 TNCP24821 2201 aa6.85□□□□□ -1.31
USF1-204ENST00000472217 TENM3Q9P273 2699 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 DNAH9Q9NYC9 4486 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 SORL1Q92673 2214 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 IGLC7A0M8Q6 106 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 A8MZ25 164 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 UPK2O00526 184 aa6.84□□□□□ -1.31
USF1-204ENST00000472217 GGCTO75223 188 aaKnown RBP6.84□□□□□ -1.31
USF1-204ENST00000472217 DHFRP00374 187 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms